8 homologs were found in PanDaTox collection
for query gene Rpal_2358 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2358  hypothetical protein  100 
 
 
96 aa  192  1e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4282  hypothetical protein  38.75 
 
 
175 aa  47.4  0.00006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1507  hypothetical protein  43.86 
 
 
123 aa  44.7  0.0004  Magnetococcus sp. MC-1  Bacteria  normal  0.116491  normal  0.0112216 
 
 
-
 
NC_004311  BRA0254  hypothetical protein  39.22 
 
 
175 aa  42.4  0.002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0230  hypothetical protein  39.22 
 
 
175 aa  42.4  0.002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6281  hypothetical protein  39.22 
 
 
176 aa  41.2  0.004  Sinorhizobium medicae WSM419  Bacteria  normal  0.267708  normal  0.408755 
 
 
-
 
NC_007964  Nham_1458  hypothetical protein  42.31 
 
 
175 aa  40.8  0.006  Nitrobacter hamburgensis X14  Bacteria  normal  0.329417  n/a   
 
 
-
 
NC_009972  Haur_2995  hypothetical protein  44 
 
 
253 aa  40.8  0.007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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