Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6281 |
Symbol | |
ID | 5320583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1200560 |
End bp | 1201090 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777880 |
Product | hypothetical protein |
Protein accession | YP_001314812 |
Protein GI | 150378217 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.267708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.408755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGTCG AAACCCATCA CCCAGCACCA AGAGAATTCG ACGTCCGACC TATATTGAGG AGCGGCGGCG AGCCGTTCCA GGCGATCATG GAGGCGGTGA ACGGGTTGAG ACCGGGCCAA GCGTTGCGGT TGCTTGCTCC CTTTCGTCCA CAGCCGCTGT TCAAAGTCAT GGAGGGCCGC GGCTTCAGCC ACGAGACACA GGAGATGCAA GGCGGCGACT GGGAAGTCCT TTTCACGCCG AAGGCGGCGG GCGCCCCCGT CGAGGTCTCT GCAGATGCCG ACAATCCGGA CTCCTGGCCC GATCCCATCG AAAACCTCGA CCTGACCGAG CTCGACCCCC CGGAGCCCAT GGTCCGCATC CTCGCGGCTG CAGAGCGGCT GCAGCCGGGC GAGGTGCTGT TTGCGCTTCT CTCCCGCGAA CCCATCTTCC TCTTCCCGGA GCTTTCAAAG CGGGGGCACC AGTGGGCGGG CAATTTCGAC GAAACACGAA CCACCTTCCG CATCTTCGTC CGTGTCGGTG ATAAGGGCTG A
|
Protein sequence | MTVETHHPAP REFDVRPILR SGGEPFQAIM EAVNGLRPGQ ALRLLAPFRP QPLFKVMEGR GFSHETQEMQ GGDWEVLFTP KAAGAPVEVS ADADNPDSWP DPIENLDLTE LDPPEPMVRI LAAAERLQPG EVLFALLSRE PIFLFPELSK RGHQWAGNFD ETRTTFRIFV RVGDKG
|
| |