Gene Smed_6281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6281 
Symbol 
ID5320583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1200560 
End bp1201090 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID640777880 
Producthypothetical protein 
Protein accessionYP_001314812 
Protein GI150378217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.267708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.408755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCG AAACCCATCA CCCAGCACCA AGAGAATTCG ACGTCCGACC TATATTGAGG 
AGCGGCGGCG AGCCGTTCCA GGCGATCATG GAGGCGGTGA ACGGGTTGAG ACCGGGCCAA
GCGTTGCGGT TGCTTGCTCC CTTTCGTCCA CAGCCGCTGT TCAAAGTCAT GGAGGGCCGC
GGCTTCAGCC ACGAGACACA GGAGATGCAA GGCGGCGACT GGGAAGTCCT TTTCACGCCG
AAGGCGGCGG GCGCCCCCGT CGAGGTCTCT GCAGATGCCG ACAATCCGGA CTCCTGGCCC
GATCCCATCG AAAACCTCGA CCTGACCGAG CTCGACCCCC CGGAGCCCAT GGTCCGCATC
CTCGCGGCTG CAGAGCGGCT GCAGCCGGGC GAGGTGCTGT TTGCGCTTCT CTCCCGCGAA
CCCATCTTCC TCTTCCCGGA GCTTTCAAAG CGGGGGCACC AGTGGGCGGG CAATTTCGAC
GAAACACGAA CCACCTTCCG CATCTTCGTC CGTGTCGGTG ATAAGGGCTG A
 
Protein sequence
MTVETHHPAP REFDVRPILR SGGEPFQAIM EAVNGLRPGQ ALRLLAPFRP QPLFKVMEGR 
GFSHETQEMQ GGDWEVLFTP KAAGAPVEVS ADADNPDSWP DPIENLDLTE LDPPEPMVRI
LAAAERLQPG EVLFALLSRE PIFLFPELSK RGHQWAGNFD ETRTTFRIFV RVGDKG