13 homologs were found in PanDaTox collection
for query gene RoseRS_3267 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_3267  hypothetical protein  100 
 
 		 320 aa  665    Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0462679 
 
 
-
 
NC_009767  Rcas_3753  hypothetical protein  95 
 
 		 320 aa  639    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.016122  hitchhiker  0.00153118 
 
 
-
 
NC_011831  Cagg_2631  hypothetical protein  29.6 
 
 		 414 aa  129  5.0000000000000004e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.906606  normal  1 
 
 
-
 
NC_011666  Msil_2060  photosynthetic reaction centre cytochrome c subunit  25.52 
 
 		 338 aa  72  0.00000000001  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.00647835 
 
 
-
 
NC_010511  M446_3705  photosynthetic reaction center cytochrome c subunit  25.68 
 
 		 345 aa  68.9  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.265729  hitchhiker  0.00384801 
 
 
-
 
NC_007802  Jann_0171  photosynthetic reaction center cytochrome c subunit  28.57 
 
 		 414 aa  64.3  0.000000003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2810  photosynthetic reaction center cytochrome c subunit  26.22 
 
 		 367 aa  63.5  0.000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.776838  normal  0.69039 
 
 
-
 
NC_010172  Mext_2738  photosynthetic reaction center cytochrome c subunit  24.52 
 
 		 369 aa  62.4  0.00000001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2860  photosynthetic reaction centre cytochrome c subunit  24.05 
 
 		 366 aa  62  0.00000001  Methylobacterium populi BJ001  Bacteria  normal  0.838439  normal  1 
 
 
-
 
NC_008789  Hhal_1603  photosynthetic reaction center subunit cytochrome c  23.34 
 
 		 362 aa  54.3  0.000003  Halorhodospira halophila SL1  Bacteria  normal  0.199827  n/a   
 
 
-
 
NC_008009  Acid345_2503  hypothetical protein  33.7 
 
 		 379 aa  49.7  0.00008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.490414 
 
 
-
 
NC_013061  Phep_2738  hypothetical protein  29.57 
 
 		 132 aa  45.8  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.397196  normal  1 
 
 
-
 
NC_009952  Dshi_3525  photosynthetic reaction center cytochrome c subunit precursor  22.49 
 
 		 360 aa  45.1  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.285625  normal  1 
 
 
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