| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3525 |
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| Symbol | pufC |
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| ID | 5713756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3703718 |
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| End bp | 3704800 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269454 |
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| Product | photosynthetic reaction center cytochrome c subunit precursor |
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| Protein accession | YP_001534859 |
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| Protein GI | 159046065 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.285625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCCA AATGGTTCGA TGAGTGGAAT TCGAAGAATC CCACGGACAT CTACAAGCCG
GCGATCGTCG TCGGTGTGGC GGGTGGCGCC GTCTTCGCAG CCGCGCTGCT GGTGAGCTGG
GGACAACCCC TGGCCACCGA CAGCATGCAG ACCGGGCCGC GGGGCACGGG CATGAGTGTG
CCCGAGTTCG TCAGCGACCT GGACACGCCC GACCCCACGA TCGAGGTCTT CCTCGCCAGC
ACGTCCGACC CGGTGATCCC GGAAGAGGGC GCGCAGACGG CGGGCGAGGC CTATGAGAAT
GTCGATCCGG TGCTCGCCGA TCTGACGGTC GAGAACTACG ACCGTCTGCT CGCGGCGATG
CGCAGCTGGA CCGGTATTCC CGATCTGCTG GAGGATCCCG ATCACTACCA GTCCAAGGTG
GCGATCAACA TGATCCAGAT GAACCAGACC ATCAACGAGG AATGGGCGGG CCACGTCTAT
GCCAATGCGG AGGTCGGCGT GACATGCTTC ACCTGCCATC GCGGGCAGGC TGTTCCGTCC
GAGGTCTGGT ACCGTATCGA TCCCGTGACG GAGAACACCT CCGGCTGGGC CTCGGTGCAG
AACCGGGCGA CCTCGCTGTC GCAGTTCACC TCGCTGCCTT CGGACGCGCT CTACCAGTAC
CTGCTCAACT ACGAGCAGAT CGCGGTCCAC GACCTGGAGT CCCGGGTCGA GACCCTGCCG
GGGGATCCCA CCTGGCAGAA CACCGAGCGG ACCTACAGCC TGATGAACTA CTTCTCCAAC
TCGCTGGGTC GGAACTGCGT GTTCTGTCAC AACAGTCGGG CCTTCTATGA CCCCGCGCAG
CACACGCCCC AATGGGCGAC CGCGATGCTC GGGATCTCGA TGGTGCAGGA GTTGAACAAC
GAGTGGATCG TGCCCATCGG CGAGGCGCAT CTGCCGCCCG AACGGCTCGG CCCGGTCTAT
AATGACGTGC CGAAGCTGGC CTGCAAGACC TGCCACAAGG GCTACCAGCA GCCGCTGCAG
GGGCTCAACG TGGTCGCGGA CTGGCCGGAA CTGGCCACGA CCGAAGGGCC CTTCTACGAC
TAG
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| Protein sequence | MLPKWFDEWN SKNPTDIYKP AIVVGVAGGA VFAAALLVSW GQPLATDSMQ TGPRGTGMSV
PEFVSDLDTP DPTIEVFLAS TSDPVIPEEG AQTAGEAYEN VDPVLADLTV ENYDRLLAAM
RSWTGIPDLL EDPDHYQSKV AINMIQMNQT INEEWAGHVY ANAEVGVTCF TCHRGQAVPS
EVWYRIDPVT ENTSGWASVQ NRATSLSQFT SLPSDALYQY LLNYEQIAVH DLESRVETLP
GDPTWQNTER TYSLMNYFSN SLGRNCVFCH NSRAFYDPAQ HTPQWATAML GISMVQELNN
EWIVPIGEAH LPPERLGPVY NDVPKLACKT CHKGYQQPLQ GLNVVADWPE LATTEGPFYD
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