11 homologs were found in PanDaTox collection
for query gene Dshi_3525 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3525  photosynthetic reaction center cytochrome c subunit precursor  100 
 
 		 360 aa  749    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.285625  normal  1 
 
 
-
 
NC_007802  Jann_0171  photosynthetic reaction center cytochrome c subunit  57.75 
 
 		 414 aa  427  1e-118  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2060  photosynthetic reaction centre cytochrome c subunit  38.61 
 
 		 338 aa  187  3e-46  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.00647835 
 
 
-
 
NC_010172  Mext_2738  photosynthetic reaction center cytochrome c subunit  36.47 
 
 		 369 aa  184  1.0000000000000001e-45  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2860  photosynthetic reaction centre cytochrome c subunit  37.82 
 
 		 366 aa  181  1e-44  Methylobacterium populi BJ001  Bacteria  normal  0.838439  normal  1 
 
 
-
 
NC_010511  M446_3705  photosynthetic reaction center cytochrome c subunit  35.65 
 
 		 345 aa  174  2.9999999999999996e-42  Methylobacterium sp. 4-46  Bacteria  normal  0.265729  hitchhiker  0.00384801 
 
 
-
 
NC_008789  Hhal_1603  photosynthetic reaction center subunit cytochrome c  34.19 
 
 		 362 aa  169  9e-41  Halorhodospira halophila SL1  Bacteria  normal  0.199827  n/a   
 
 
-
 
NC_010505  Mrad2831_2810  photosynthetic reaction center cytochrome c subunit  33.33 
 
 		 367 aa  166  8e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.776838  normal  0.69039 
 
 
-
 
NC_011831  Cagg_2631  hypothetical protein  27.73 
 
 		 414 aa  55.1  0.000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.906606  normal  1 
 
 
-
 
NC_009523  RoseRS_3267  hypothetical protein  22.49 
 
 		 320 aa  45.1  0.002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0462679 
 
 
-
 
NC_009767  Rcas_3753  hypothetical protein  22.01 
 
 		 320 aa  45.1  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.016122  hitchhiker  0.00153118 
 
 
-
 
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