13 homologs were found in PanDaTox collection
for query gene Rcas_3753 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_3753  hypothetical protein  100 
 
 		 320 aa  665    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.016122  hitchhiker  0.00153118 
 
 
-
 
NC_009523  RoseRS_3267  hypothetical protein  95 
 
 		 320 aa  627  1e-178  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0462679 
 
 
-
 
NC_011831  Cagg_2631  hypothetical protein  27.92 
 
 		 414 aa  130  3e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.906606  normal  1 
 
 
-
 
NC_011666  Msil_2060  photosynthetic reaction centre cytochrome c subunit  25.52 
 
 		 338 aa  73.2  0.000000000005  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.00647835 
 
 
-
 
NC_010511  M446_3705  photosynthetic reaction center cytochrome c subunit  25.29 
 
 		 345 aa  69.3  0.00000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.265729  hitchhiker  0.00384801 
 
 
-
 
NC_007802  Jann_0171  photosynthetic reaction center cytochrome c subunit  28.9 
 
 		 414 aa  65.9  0.0000000008  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2738  photosynthetic reaction center cytochrome c subunit  24.52 
 
 		 369 aa  64.7  0.000000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2810  photosynthetic reaction center cytochrome c subunit  26.44 
 
 		 367 aa  64.7  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.776838  normal  0.69039 
 
 
-
 
NC_010725  Mpop_2860  photosynthetic reaction centre cytochrome c subunit  24.05 
 
 		 366 aa  64.3  0.000000003  Methylobacterium populi BJ001  Bacteria  normal  0.838439  normal  1 
 
 
-
 
NC_008789  Hhal_1603  photosynthetic reaction center subunit cytochrome c  24.39 
 
 		 362 aa  57.8  0.0000002  Halorhodospira halophila SL1  Bacteria  normal  0.199827  n/a   
 
 
-
 
NC_008009  Acid345_2503  hypothetical protein  33.7 
 
 		 379 aa  48.5  0.0001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.490414 
 
 
-
 
NC_013061  Phep_2738  hypothetical protein  27.83 
 
 		 132 aa  45.1  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.397196  normal  1 
 
 
-
 
NC_009952  Dshi_3525  photosynthetic reaction center cytochrome c subunit precursor  22.01 
 
 		 360 aa  45.1  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.285625  normal  1 
 
 
-
 
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