| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0171 |
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| Symbol | |
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| ID | 3932608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 164358 |
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| End bp | 165602 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902513 |
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| Product | photosynthetic reaction center cytochrome c subunit |
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| Protein accession | YP_508113 |
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| Protein GI | 89052662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCCA AGTGGTTTGA TAAGTGGAAT GACGACAATC CCACTAACAT CTTTGGCCCC
GCGATAGCTG TTGGTGCCCT GGGCGGCGCG GTCTTTGTCG CGGCTTTGAT CGTGGGCTTT
GGCCAACCCT ATGCCACCGC GTCGATGCAG ACGGGCCCCC GCGGCACCGG CATGCATGTC
GCGGAGTTTG AGGCGAGCCT GGCTGCCGGC GATCCCACGG TCATCGATTT CTACACCGAT
GAGCCTTTCG TTCCGGAAGA GGGGGAAGAG CTGGCGGGCG ATATCTACGA GAACGTCCAG
GTTCTGGGCG ATCTCACCGA TGCCAACTTC AACCGTCTGA TGGGTGCGAT CACCCAATGG
GTCGCCCCGG AAGAGGGGTG TACCTACTGT CACGCCAATG CGGCGGATGG GGAGTATGCG
GATGATGACC TTTATACCAA GGTCGTGGCC CGCTCGATGT TGACGATGAC GCGCAACATC
AACGTGAACT GGGATGCCCA TGTGAACGCC AACTACGAAG TCGGCGTCAC GTGCTACACC
TGTCACCGCG GTCAGCCCGT ACCAAACAAC GTCTGGTTCC GCATCAGCCC GGTGAACGAG
AATGCGGAAG GCTGGAGCGC GAACCAGAAC CGCGCGACCA TGGCGTCCAA CTTCACGTCT
CTGCCGTCGG ACTATCTGGA ACATTACCTG CTAGAGTCCG ACGACGGTGG CTACAACATG
ATCGCGGTCC ATGACCTCGA CAGCCGCGTG CAGCAGCAGC CCGGTGATCC GCTGATCCAG
CAGACCGAAC GGACCTATGC GTTCATGAAC TACATCTCGA ACTCTCTGGG GGTGAATTGC
ACGTTCTGCC ACAATTCCCG CGCGTTCTAC GATGGCGCTC AGAACACGCC GCAATGGGGC
ACGGCATCGC TCGGCATCAT CATGGTGCAA GAGATGATCG CAGAGCATCT GCTGCCGCTC
CAGGATGTGT ACCCGGAAAA CCGGCTCGGG CCGGTCTACG GCGACGCCCC CCTGGCCGCT
TGCCGGACGT GTCACCAAGG CTATCAGCAA CCGATGCAGG GCCTGAACGT GATCGCGAAC
TGGCCTGAGT TGAACGTCCT AGAAGGCCCG CCGGACTATT CAGCCTGGGA AGTTGCGGAG
GCTGATCCGG AGCCGGAGGC CGCCGAGGCC GAAGACATGG ATCCCGAGGC AGACGCGCCC
GAGGCCGATG AAGACCCGGA AGCTGAAGAA GAGGTTTCCG AGTGA
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| Protein sequence | MFPKWFDKWN DDNPTNIFGP AIAVGALGGA VFVAALIVGF GQPYATASMQ TGPRGTGMHV
AEFEASLAAG DPTVIDFYTD EPFVPEEGEE LAGDIYENVQ VLGDLTDANF NRLMGAITQW
VAPEEGCTYC HANAADGEYA DDDLYTKVVA RSMLTMTRNI NVNWDAHVNA NYEVGVTCYT
CHRGQPVPNN VWFRISPVNE NAEGWSANQN RATMASNFTS LPSDYLEHYL LESDDGGYNM
IAVHDLDSRV QQQPGDPLIQ QTERTYAFMN YISNSLGVNC TFCHNSRAFY DGAQNTPQWG
TASLGIIMVQ EMIAEHLLPL QDVYPENRLG PVYGDAPLAA CRTCHQGYQQ PMQGLNVIAN
WPELNVLEGP PDYSAWEVAE ADPEPEAAEA EDMDPEADAP EADEDPEAEE EVSE
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