14 homologs were found in PanDaTox collection
for query gene RoseRS_3032 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3032  hypothetical protein  100 
 
 
157 aa  319  8e-87  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2142  hypothetical protein  63.69 
 
 
155 aa  197  6e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0760456  normal  0.0600804 
 
 
-
 
NC_007333  Tfu_2402  hypothetical protein  32.77 
 
 
219 aa  48.9  0.00002  Thermobifida fusca YX  Bacteria  normal  0.745557  n/a   
 
 
-
 
NC_013093  Amir_6436  protein of unknown function DUF1707  32.71 
 
 
218 aa  47.8  0.00006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3489  putative transmembrane protein  29.17 
 
 
234 aa  46.2  0.0002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.292504  normal 
 
 
-
 
NC_013159  Svir_05520  protein of unknown function (DUF1707)  28.33 
 
 
215 aa  43.1  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5250  protein of unknown function DUF1707  28.68 
 
 
242 aa  43.5  0.001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.935721  normal 
 
 
-
 
NC_013441  Gbro_1382  protein of unknown function DUF1707  29.9 
 
 
217 aa  43.5  0.001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1305  hypothetical protein  34.62 
 
 
221 aa  42.4  0.002  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.000000716173  n/a   
 
 
-
 
NC_013510  Tcur_1783  protein of unknown function DUF1707  24.79 
 
 
206 aa  42  0.004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00805888  n/a   
 
 
-
 
NC_011899  Hore_08380  hypothetical protein  25.62 
 
 
219 aa  41.6  0.005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6701  hypothetical protein  26.5 
 
 
276 aa  41.6  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.581822  normal  0.382869 
 
 
-
 
NC_013131  Caci_0710  protein of unknown function DUF1707  30.53 
 
 
214 aa  41.2  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.537634  normal  0.113725 
 
 
-
 
NC_014158  Tpau_3297  protein of unknown function DUF1707  34.02 
 
 
200 aa  41.2  0.006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>