Gene RoseRS_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3032 
Symbol 
ID5210000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3813001 
End bp3813474 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID640596624 
Producthypothetical protein 
Protein accessionYP_001277346 
Protein GI148657141 
COG category[S] Function unknown 
COG ID[COG4758] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA TGAGTCTGTT TGGTGATGTT GAGCATATCA ACACCCATAC CCATCTGGAA 
GGCGAGAGTT TTACGGCAAT GTTCGGCAGA CTCACCGTTG ATCTGACACG CCAGCGACTC
TCGTCCGGCG ATCACGCCAT CGGCGCCTAC GCACTGTTTG GTCAGGTCAC AATCCGCGTC
CCCAACGATG CTGGCATCCA CGTGGATGGC AGCGCGATAA TGGGACAGAC GGGGTATGAG
TGGCGTTCAG AAGACAACGA ACTGCACTCT CCTGTCGGGT TGCCGGAGAT CGAATTCGAG
ACAGCGCCGG TGCGCCTGCG CATTACTGCC GTTGCGATGT TTGGCGAGGT AAAGATCGTG
CGGGTTGTAA CCGGGGAAAG AACCGCACCG GCGCTGCCTG GTGAACCATT GCCAGAAATG
TCCAGCAACA CTGGATCGTA TGAGGGTGAG ACCCGGCGGA TCGCCAGCCT GTGA
 
Protein sequence
MSSMSLFGDV EHINTHTHLE GESFTAMFGR LTVDLTRQRL SSGDHAIGAY ALFGQVTIRV 
PNDAGIHVDG SAIMGQTGYE WRSEDNELHS PVGLPEIEFE TAPVRLRITA VAMFGEVKIV
RVVTGERTAP ALPGEPLPEM SSNTGSYEGE TRRIASL