Gene Tpau_3297 details

Gene Information

• Locus tag: Tpau_3297
• ID: 9157471
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3389443
• End bp: 3390045
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 68%
• Product: protein of unknown function DUF1707
• Protein accession: YP_003648221
• Protein GI: 296140978

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACG AACTCGAGCC GCGGCGCGAC GCCCTCCGGG CTTCCGACCA CGACCGCAAT 
CGCGTAGTCA CGATGCTCTC CGACGCTCTT GGCCAGGGGC AGATCACCTT TCCCGAGTAC 
GAGGAACGCT CTCGACACGC GGTCGAGGCT CGCACCTTCG CGGACCTCGA CCGCCTCGTC 
GTGGATCTGC CCGCGGTGTC GGTGAATCCG CCCGCACCCG CACTTCCCGC GTACCAGCCC 
CCGGCGATCC CGCCGGAGGG ACTGCCGCGC CTCGGTGATC ACAAGCTGGC GATCATGTCG 
GGCACGAACG TGCGGGGCCC GATCGCCGTG GGCGCCGAAC ATTCGGCATC CGCGTTCTGG 
GGCGGTGTCA AACTCGACCT CCGCGAAGCC ACCTTCCTCG CCCGCGATGT CACGATCAAC 
GCCTACGCGG TGATGGGCGG GGTGGAGATC ATCGTGCCGC GCGGTGCGAT CGTGCAGGTG 
GACGGCCTCG CCATCATGGG CGCCTTCGAG AACAAGGTGC AGCACGTGGG CGACGGGTCC 
GGCCCCCGCA TCAGGGTCAC CGGGTTCGCC TTCTGGGGTG GCGTCGAGGT GAAGACGAAG 
TAG 

 

Protein sequence

MSDELEPRRD ALRASDHDRN RVVTMLSDAL GQGQITFPEY EERSRHAVEA RTFADLDRLV 
VDLPAVSVNP PAPALPAYQP PAIPPEGLPR LGDHKLAIMS GTNVRGPIAV GAEHSASAFW 
GGVKLDLREA TFLARDVTIN AYAVMGGVEI IVPRGAIVQV DGLAIMGAFE NKVQHVGDGS 
GPRIRVTGFA FWGGVEVKTK