11 homologs were found in PanDaTox collection
for query gene Rmet_6288 on replicon NC_007972
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007972  Rmet_6288  hypothetical protein  100 
 
 		 406 aa  810    Cupriavidus metallidurans CH34  Bacteria  normal  0.110727  normal  1 
 
 
-
 
NC_012855  Rpic12D_4765  hypothetical protein  31.9 
 
 		 471 aa  152  1e-35  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010679  Bphyt_7249  hypothetical protein  33.96 
 
 		 426 aa  146  5e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2071  prepilin-type N- cleavage/methylation domain protein  25.94 
 
 		 478 aa  97.1  5e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00288729  n/a   
 
 
-
 
NC_010087  Bmul_5558  hypothetical protein  29.41 
 
 		 400 aa  83.2  0.000000000000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.363207  normal  0.0854155 
 
 
-
 
NC_013421  Pecwa_1581  putative type IV prepilin  26.85 
 
 		 482 aa  76.6  0.0000000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1761  putative type IV prepilin  26.05 
 
 		 512 aa  69.3  0.0000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_010553  BamMC406_6558  hypothetical protein  25.84 
 
 		 404 aa  56.6  0.0000008  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007901  Rfer_4492  methylation  27.25 
 
 		 523 aa  55.5  0.000002  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_3698  hypothetical protein  26.58 
 
 		 413 aa  53.9  0.000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0151181  normal  1 
 
 
-
 
NC_009705  YpsIP31758_B0021  type IV pilus biogenesis protein PilV  33.04 
 
 		 428 aa  43.5  0.006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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