| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1581 |
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| Symbol | |
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| ID | 8529971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1710973 |
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| End bp | 1712421 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | |
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| Product | putative type IV prepilin |
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| Protein accession | YP_003258979 |
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| Protein GI | 261820873 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAC ATAAAAAAGG GTTTTCCTTA TTGGAAATAA CGCTGGTGTT AGGTGTTGGC
GTAGCAATGG CTTTCATGAA GTTTCAAGAC ATGAAAAGTA ATCAAGAAAA CATTATGGCG
AATACCGTAG GTTCACAGAT GAAACAGATG GGGGAAGCAG TTAATCGTTA TATCAGTATC
CGTTATGACA AGCTTTCAAC ATTAACTTCA AGCAGCAGCC AGAGCAGCGA TCCGGGACCA
AGAACCTATT CGGCTAATGG CTGTGAAATT ACGCACCAGA CGTTGGTAAA TGAAGGGCTG
TTACCTGCGG GTTATACTGG CGTCAACATG CAAAAATCCT CTTATAAGAT ACTGTTGAAA
CGCGCAGGAA CGACACCTAA CTACGTTATC AATGGACTGG TTATCACCAC GTTGCCGTGG
TTAGAAGGGA ACCGTGTTCG TTATGACTTA TTAGGTCGTG CTATGCAAGC CTCTGGTATC
GATAGCGGTA TGACGCAATC AGCGACTGTT GCATCGGGTA CGGGTGGTCA ATGGACTGAG
GACCGAAGCA ATTATGCCGG GATTAAATCG GCGGGGCTGT TGGCTTACCG TGTAGGATAC
GATTCCTCAA TGTATTCGGT TTACCTGCGT CGTGATGGCA CACTTCCTAT GACCGGAAAC
CTCAATATGG GCGGTCAGAG TATTAATAAT GCCAAAGACA TTACCGCATC GGGTGACGTG
AACGCGACCT CATTTAATGG CTCGTATGGA CGTTTTGCCA AGAACGTCAA TGTGTCTGAG
GATTTAAATG TGATGGGGTT TTCCACATTT GGTAAGAACG TATCGATGAA CAGCCAGCTT
ACGGTAAAAA ACGGCATCAA CTCTGAAAAC TATATTTCAG CCAAAACCCA GAGCAGCAAA
CTTCAGATTG GTGGCGGTGG CACCAGCGAT CCGAATATGA TTCTGTTGAA TGTATCAGGC
GGGGCAGGTG ATGGCTACCT TTCCCTGAAT GGTGATAACA AGTCCTCTGT TAAGCTGGAT
ATATGGGGAA GCCAAAGAAT AAGAGGCGAT TTAACACTAT CGCCTTCTAG TGATAGTTTA
GCCAAAGGCG ATATTGTGGC ATCAGGAAAT ATCGCTTCAT CAGGTATTGT TTCAGGGCAA
TATTTACAGG TTAAATCGAC TTCTGTGGCT GGCGCGAGTT GTTCACCTGA TGGATTAATT
AGTAAAGACG ATAAAGGCGC TCTACTAATT TGTCAGTCAG GAAAATGGAC AGGGAGTGAT
TCAAAGCAAG GAGCACTGTG TGGCTTTTCA TCGGATGACC ATTTGAGTGG GAATATTAAT
GTGTATTTAT GTAAGGGGTA TAATCCAAGA AAATCTTGTC CGGCTGGTTA TGTTCAGTCC
AGAATATTTC AGGCCGATTC AAATTTTTTA TATTCCTGTG TCATTACTGA AAATTTGAGT
GGTGAATAG
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| Protein sequence | MIKHKKGFSL LEITLVLGVG VAMAFMKFQD MKSNQENIMA NTVGSQMKQM GEAVNRYISI
RYDKLSTLTS SSSQSSDPGP RTYSANGCEI THQTLVNEGL LPAGYTGVNM QKSSYKILLK
RAGTTPNYVI NGLVITTLPW LEGNRVRYDL LGRAMQASGI DSGMTQSATV ASGTGGQWTE
DRSNYAGIKS AGLLAYRVGY DSSMYSVYLR RDGTLPMTGN LNMGGQSINN AKDITASGDV
NATSFNGSYG RFAKNVNVSE DLNVMGFSTF GKNVSMNSQL TVKNGINSEN YISAKTQSSK
LQIGGGGTSD PNMILLNVSG GAGDGYLSLN GDNKSSVKLD IWGSQRIRGD LTLSPSSDSL
AKGDIVASGN IASSGIVSGQ YLQVKSTSVA GASCSPDGLI SKDDKGALLI CQSGKWTGSD
SKQGALCGFS SDDHLSGNIN VYLCKGYNPR KSCPAGYVQS RIFQADSNFL YSCVITENLS
GE
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