10 homologs were found in PanDaTox collection
for query gene BamMC406_6558 on replicon NC_010553
Organism: Burkholderia ambifaria MC40-6



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010553  BamMC406_6558  hypothetical protein  100 
 
 
404 aa  803    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5558  hypothetical protein  61.71 
 
 
400 aa  489  1e-137  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.363207  normal  0.0854155 
 
 
-
 
NC_010682  Rpic_1540  hypothetical protein  31.96 
 
 
432 aa  142  9e-33  Ralstonia pickettii 12J  Bacteria  normal  0.0216242  normal 
 
 
-
 
NC_012849  Rpic12D_5205  putative adhesin precursor  31.96 
 
 
432 aa  142  9e-33  Ralstonia pickettii 12D  Bacteria  normal  0.685771  normal 
 
 
-
 
NC_008826  Mpe_B0064  hypothetical protein  25.53 
 
 
457 aa  72.4  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00583147 
 
 
-
 
NC_013421  Pecwa_1761  putative type IV prepilin  28.67 
 
 
512 aa  63.2  0.000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007972  Rmet_6288  hypothetical protein  26.51 
 
 
406 aa  62.8  0.00000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.110727  normal 
 
 
-
 
NC_013421  Pecwa_1581  putative type IV prepilin  27.72 
 
 
482 aa  57  0.0000005  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2071  prepilin-type N- cleavage/methylation domain protein  25.86 
 
 
478 aa  56.2  0.000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00288729  n/a   
 
 
-
 
NC_012855  Rpic12D_4765  hypothetical protein  26.07 
 
 
471 aa  50.8  0.00004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>