Gene Rmet_6288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6288 
Symbol 
ID4036726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp142558 
End bp143778 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content60% 
IMG OID637975314 
Producthypothetical protein 
Protein accessionYP_582097 
Protein GI94152695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.110727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGT CGAACTACGC TATGGGGCTG GCGCTGAGCA GCGTCGCACT AATGGCATCG 
GTGCCGTGGA CGTACGCGGA GATTGAAGAG GTTCAGTCGG TCGGCACGGG CAACTACATG
GCAAACATCG CTTCGGCCGT GAATACCTAC ACATTCGAGG CATTTACGGA CCTGGCGAAG
AGCCCGACCG TCCCGACCAA CCTCACGGTG GGCGGCAAGA CGATTGGGGT GGCAAGTCCG
CTGCATCCGA CGGTCCAGGA TCTCATCAAC TTTGGACTTC TGCCGATCGG CTACACGGAC
ATCAGCCCGC TGGGTCTCTC GTTCCGTGTG GACCTGACGC CAACAAATTG CGGGGCTGAC
ATCACCGCGT GCTCGATCCC CGGTCTGGTG TACTCGACGA CCGGATACCG GGACGCTGTT
GGCCGCGTTC GGACCGACCT GCTGGGTCTT GCTGTGGCGA AGGCTGGGCA GGACGCCGGC
GTTTCGTATG CGGAGACGCC GGCCACAATC ACCGGCATGT CCGCCAGCTG GTCCACGGTG
AATCCGGTTG CTGCACAGCC CTCGGGTGTG CTGGCGATGC GGACCGGATC GAGTTCGTTG
CTGGCCCAGT CGATGAACCA GTTCTACAAG CGAGACGGCT CGCTGAACTT GACCGGCCCG
ATGGACGCGA ACAACCAGGC GATGAATCGA GTTGGGAATT TCCAGTCGAA TGGGTCCGTG
TCGGCGGCCG GAAATGTCGC CGCTAGCGGT AACGTGACGG GAAACGTCTT GGCCGGCAAT
GGGGTCCAAT CCTACGGAAA TGTATCTGCA GCTGGAAACA TGTCGGGAAA CGGCGTGTAC
GGCAACTACG TCCAGTCCAA CGGCAATATG GTAGCAACTG GTCAGGTCGT CGCGAGTCAA
CTGACCTCGA ATGGTAATGT TAGCAGCGCG GGAAACGTTA CAGCCAATGG GTATCTATTT
GCTGCCGGCG CAATTGTCCC CTCGGCGGCA GGCGGACAGC AGGTCTACGA TGGCCAAGGT
TGCGGTGATC CTCAAGGGTC CATCCGGAGC GATTCCGCGG GCAAGATCCT GTCTTGCCAA
TCTGGCGTGT GGCGCAGTGT CGGCGGGGGT GTCGGCAAAG CGGTCGCGCA AGTCTATATG
GCCAACTGTA GCGATTTGAT GGTTCGGTAC ACTGACGGAA CGGAGGGGTT GGTCAGTAGG
TTCGGATTCA CCTGCAACTA G
 
Protein sequence
MLMSNYAMGL ALSSVALMAS VPWTYAEIEE VQSVGTGNYM ANIASAVNTY TFEAFTDLAK 
SPTVPTNLTV GGKTIGVASP LHPTVQDLIN FGLLPIGYTD ISPLGLSFRV DLTPTNCGAD
ITACSIPGLV YSTTGYRDAV GRVRTDLLGL AVAKAGQDAG VSYAETPATI TGMSASWSTV
NPVAAQPSGV LAMRTGSSSL LAQSMNQFYK RDGSLNLTGP MDANNQAMNR VGNFQSNGSV
SAAGNVAASG NVTGNVLAGN GVQSYGNVSA AGNMSGNGVY GNYVQSNGNM VATGQVVASQ
LTSNGNVSSA GNVTANGYLF AAGAIVPSAA GGQQVYDGQG CGDPQGSIRS DSAGKILSCQ
SGVWRSVGGG VGKAVAQVYM ANCSDLMVRY TDGTEGLVSR FGFTCN