11 homologs were found in PanDaTox collection
for query gene Rleg2_3615 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_3615  transport-associated  100 
 
 
96 aa  190  7e-48  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3903  transport-associated  87.5 
 
 
96 aa  130  6e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.042758 
 
 
-
 
NC_009636  Smed_1550  transport-associated  48.86 
 
 
92 aa  54.3  0.0000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.178686  normal  0.143106 
 
 
-
 
NC_011989  Avi_0536  hypothetical protein  42.68 
 
 
93 aa  53.1  0.000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4411  transport-associated  33.33 
 
 
244 aa  42  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.128668  normal  0.799504 
 
 
-
 
NC_010625  Bphy_5640  transport-associated  37.66 
 
 
117 aa  41.6  0.004  Burkholderia phymatum STM815  Bacteria  normal  normal  0.527618 
 
 
-
 
NC_011368  Rleg2_5136  hypothetical protein  35.29 
 
 
88 aa  41.2  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2416  transport-associated  43.86 
 
 
118 aa  41.2  0.005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3880  putative periplasmic protein  43.86 
 
 
117 aa  40.8  0.006  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0874  transport-associated  36.92 
 
 
163 aa  40.4  0.008  Polaromonas sp. JS666  Bacteria  normal  normal  0.586964 
 
 
-
 
NC_009636  Smed_3423  transport-associated  39.34 
 
 
119 aa  40  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
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