Gene Smed_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4411 
Symbol 
ID5318124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp906237 
End bp906971 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID640776215 
Producttransport-associated 
Protein accessionYP_001313148 
Protein GI150376552 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.799504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAC AACCGGACTA TGGCAGATAC GATCCCTACA CCCGACGCGA TTGGCCCCGC 
CGCGACTGGG AGAATGAACG TTCACGCGAT CCTTACCATG GATCCGAGCG CAATCGCGGC
CGGGGACGCG GCCGCCTCGG TGAGGAAGTC GAGCCTCGCG GCGCAGACTA CGAGAACTCG
ATGTCATGGC CCACCGGAAG CTATCGCAGT GAAAGCGAAC GCTGGAGCGA TGACGACGAC
GATCGACGGG GCCGCGAGCG GTATTTCAGA GACTATCACG GCCCCGGCTA CGGCTACCGT
GGCGAAGGGC GCTACCGCGG TTATGGAGGC TATGGCGAGA CGCGCGATTA CCGCCGTGGC
GACCGCGATT TCCTAGACCG CGCGAGCGAT GAGGTGGCCT CATGGTTCGG CGACGAAGAT
GCCGAACGCC GGCGCGAGAT GGACCGGCAT CGTGGCAAGG GCCCCAAAGG CTACAGGCGG
ACTGACGGCC GCATCCAGGA AGACGTCAGC GATCGTCTGA GCGACGACGG CGCTCTCGAT
GCCTCGAACA TCGAGGTGAG CGTGACAAAT GGCGAAGTAC AACTCAACGG CACGGTGAGT
TCGAAATGGG CGAAACGCCG CGCCGAGGAC TGCGCCGAAA ACGTGTCGGG GGTCACCAAT
GTGCAAAACA ACTTGCGCAT AGAACCGGAT ACGAGCACCG TGCAGCAGAA CCCCAACCTG
ACCGATCTCA GTTGA
 
Protein sequence
MPRQPDYGRY DPYTRRDWPR RDWENERSRD PYHGSERNRG RGRGRLGEEV EPRGADYENS 
MSWPTGSYRS ESERWSDDDD DRRGRERYFR DYHGPGYGYR GEGRYRGYGG YGETRDYRRG
DRDFLDRASD EVASWFGDED AERRREMDRH RGKGPKGYRR TDGRIQEDVS DRLSDDGALD
ASNIEVSVTN GEVQLNGTVS SKWAKRRAED CAENVSGVTN VQNNLRIEPD TSTVQQNPNL
TDLS