5 homologs were found in PanDaTox collection
for query gene Avi_0536 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_0536  hypothetical protein  100 
 
 
93 aa  183  6e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2809  transport-associated protein  36.23 
 
 
273 aa  43.9  0.0007  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00612028  n/a   
 
 
-
 
NC_011369  Rleg2_3615  transport-associated  42.68 
 
 
96 aa  43.5  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3880  putative periplasmic protein  36.76 
 
 
117 aa  40.4  0.008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0799  transport-associated  35.29 
 
 
117 aa  40.4  0.008  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.655099 
 
 
-
 
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