| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0536 |
|---|
| Symbol | |
|---|
| ID | 7388942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 455424 |
|---|
| End bp | 455705 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643650170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548383 |
|---|
| Protein GI | 222147426 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTCA AACCGGCTAA AACTTTCGGG GAGACCCCTG GTATCGTTGA GGAAAATCCG
CCTCTGGCGG AGTTGGAAAC GGCAGTGGCC TCTCAGCTTG CTGGTTCCGA CGGTATCGAT
GCCTCTGATA TCGAGGTGAT ATCGATCGGC AATGAAATTT GTTTGCGAGG CCTTGTCTAT
TCCGAGAGCG AGGTCGACCG AGCCGTTGAA GTCGCTCTTT CAGTTCCCGG TGTTTTCAAG
GTTTCCGTCG ACCTGGAGAT TGTCGAGCGC ACGATCCATT GA
|
|---|
| Protein sequence | MVFKPAKTFG ETPGIVEENP PLAELETAVA SQLAGSDGID ASDIEVISIG NEICLRGLVY
SESEVDRAVE VALSVPGVFK VSVDLEIVER TIH
|
|---|
| |