8 homologs were found in PanDaTox collection
for query gene Rfer_4262 on replicon NC_007901
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007901  Rfer_4262  conjugal transfer protein TrbC  100 
 
 		 122 aa  243  6e-64  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_011365  Gdia_1012  Conjugal transfer protein TrbC  34.15 
 
 		 108 aa  46.2  0.0001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.84905  normal  1 
 
 
-
 
NC_007925  RPC_3540  conjugal transfer protein TrbC  37.1 
 
 		 114 aa  42.4  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0127042  normal  0.47639 
 
 
-
 
NC_013930  TK90_2818  Conjugal transfer protein TrbC  30.43 
 
 		 132 aa  42.7  0.002  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  0.611363 
 
 
-
 
NC_007643  Rru_A0807  conjugal transfer protein TrbC  35.29 
 
 		 110 aa  41.6  0.003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1193  conjugal transfer protein TrbC  34.12 
 
 		 110 aa  42  0.003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.277659  normal  1 
 
 
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NC_009719  Plav_3542  conjugal transfer protein TrbC  34.12 
 
 		 110 aa  42  0.003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_3365  conjugal transfer protein trbC  35.48 
 
 		 109 aa  41.2  0.005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.996554  normal  0.615312 
 
 
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