| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2818 |
|---|
| Symbol | |
|---|
| ID | 8829230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | + |
|---|
| Start bp | 174078 |
|---|
| End bp | 174476 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Conjugal transfer protein TrbC |
|---|
| Protein accession | YP_003494770 |
|---|
| Protein GI | 290243100 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.611363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC AAATGAAGGA GCAGGCGCTG GAGCGCGCCG AACGAGCGAG CAGTTTTGTC
GCGCGCCATC GATCCGAGCT GATGAAGTGG AATATCGTGA GCCTGTTGGC GTTGATTGTC
ATCTTCACGA TCGAGCCTGC GATGGCGCAG TCAGTGGATA CGACCCAAGC CATGCCGTGG
GAAGGCCCCT TGGAAACCAT TATGAACTCG CTGTGCGGGC CTGTGGCCTC GATGGCGGCG
GTCATCGCGT TTGTCGTGAC CGGTCTGCTA GTGGCCTTCG GTGAAGCGAA TGGCCTGTTC
GGCGTGATGA TGCGGATTGC TTTCGGGCTG AGTATTGCCC TGTTCTCTGT GAACTTCCTG
GAGTTCGTCG GGGTGTCGGG ATTCGTCTGC GGACGGTAG
|
|---|
| Protein sequence | MIEQMKEQAL ERAERASSFV ARHRSELMKW NIVSLLALIV IFTIEPAMAQ SVDTTQAMPW
EGPLETIMNS LCGPVASMAA VIAFVVTGLL VAFGEANGLF GVMMRIAFGL SIALFSVNFL
EFVGVSGFVC GR
|
|---|
| |