Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0807 |
Symbol | |
ID | 3834440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 961635 |
End bp | 961967 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637824898 |
Product | conjugal transfer protein TrbC |
Protein accession | YP_425898 |
Protein GI | 83592146 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGAT TTGCTCTTCG CACGCGCCGT CATCTGGCGA CAGTCGGCTC TATCACCGTC ATGACCCTGG CCCTGGCTCC AGCCGCTTAT GCCTCCGGCT CGTCGATGCC CTGGGAGACG CCGCTGGAGC AGATCCTCGA CTCCGTCCAA GGGCCGGTGG CCAAGATCAT CTCGGTGATC ATCATCACCG TGACCGGCCT GACGCTGGCG TTCGGTGAGA CCTCGGGCGG ATTCCGCCGG CTGATACAGA TCGTCTTCGG CCTGTCGATC GCCTTCGCCG CCAGCTCGTT TTTCCTGTCG TTCTTCTCGT TTTCCGGCGG AGCGCTGGTG TGA
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Protein sequence | MTRFALRTRR HLATVGSITV MTLALAPAAY ASGSSMPWET PLEQILDSVQ GPVAKIISVI IITVTGLTLA FGETSGGFRR LIQIVFGLSI AFAASSFFLS FFSFSGGALV
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