| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3540 |
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| Symbol | |
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| ID | 3973947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3933424 |
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| End bp | 3933768 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926651 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_533398 |
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| Protein GI | 90425028 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0127042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.47639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATC GTCCGCACCC ACTTCGCCGC GCCATCGCCA CGCCCGCCGG CTTTACAACC
CTGACCACGG TCCTGGCTTC GTTGACCGCT GCACCGGCTT GGGCGGCCGG CTCCAGCATG
CCGTGGGAGC AACCGCTCAA CCAGATCCTG CAATCGGTCG AAGGCCCGGT CGCCAAGATC
ATGGCGGTGA TCATCATCAT CGTCACCGGC CTGACATTGG CGTTCGGCGA TACCTCGGGT
GGATTTCGCC GACTGATCCA GATCGTGTTC GGTCTCTCGA TTGCGTTCGC GGCAAGCTCC
TTCTTCCTCT CGTTCTTCTC CTTCGGCGGC GGAGCGCTGG TCTGA
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| Protein sequence | MIHRPHPLRR AIATPAGFTT LTTVLASLTA APAWAAGSSM PWEQPLNQIL QSVEGPVAKI
MAVIIIIVTG LTLAFGDTSG GFRRLIQIVF GLSIAFAASS FFLSFFSFGG GALV
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