| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1193 |
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| Symbol | |
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| ID | 5455518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1330586 |
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| End bp | 1330918 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876764 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_001412471 |
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| Protein GI | 154251647 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.277659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA CCACCATGCG CGTTCGCCGC TATGCCGCGA CGGCCGCCGC CTTCATCTAC
ATCAATCTCG TCCTCGTTCC CGCCGCCCAT GCCTCCGGCT CGTCCATGCC GTGGGAAGCA
CCGCTCCAGA AAATTCTCGA ATCCATCGAA GGGCCGGTCG CCAAGATCGT CGCCGTCATC
ATCATCATCG CCACCGGCCT GGCGCTGGCG TTCGGTGACA CGTCCGGCGG CTTCCGGAAG
CTGATCCAGA TCGTCTTCGG TCTCAGCATC GCGTTTGCGG CGTCGAGCTT CTTCCTGTCG
TTCTTCTCAT TCGGCGGCGG GGCGCTCATC TGA
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| Protein sequence | MIRTTMRVRR YAATAAAFIY INLVLVPAAH ASGSSMPWEA PLQKILESIE GPVAKIVAVI
IIIATGLALA FGDTSGGFRK LIQIVFGLSI AFAASSFFLS FFSFGGGALI
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