216 homologs were found in PanDaTox collection
for query gene Rfer_2870 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2870  molybdate metabolism transcriptional regulator  100 
 
 
372 aa  759    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2477  transcriptional regulator of molybdate metabolism, LysR family  66.22 
 
 
373 aa  498  1e-140  Acidovorax ebreus TPSY  Bacteria  normal  0.497113  n/a   
 
 
-
 
NC_008782  Ajs_3130  molybdate metabolism transcriptional regulator  65.95 
 
 
373 aa  496  1e-139  Acidovorax sp. JS42  Bacteria  normal  0.839309  normal  0.445387 
 
 
-
 
NC_007948  Bpro_1757  molybdate metabolism transcriptional regulator  61.29 
 
 
371 aa  462  1e-129  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_008781  Pnap_1508  molybdate metabolism transcriptional regulator  61.35 
 
 
375 aa  448  1e-125  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0203  transcriptional regulator of molybdate metabolism, LysR family  63.22 
 
 
374 aa  447  1.0000000000000001e-124  Thauera sp. MZ1T  Bacteria  normal  0.433996  n/a   
 
 
-
 
NC_012791  Vapar_1577  transcriptional regulator of molybdate metabolism, LysR family  63.39 
 
 
369 aa  429  1e-119  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1822  molybdate metabolism transcriptional regulator  54.21 
 
 
386 aa  369  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00250223 
 
 
-
 
NC_008825  Mpe_A2224  molybdate metabolism transcriptional regulator  54.97 
 
 
375 aa  370  1e-101  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3016  transcriptional regulator of molybdate metabolism, LysR family  40.79 
 
 
370 aa  239  5.999999999999999e-62  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0386  molybdate metabolism transcriptional regulator  41.25 
 
 
362 aa  233  4.0000000000000004e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0616  molybdate metabolism transcriptional regulator  35.46 
 
 
365 aa  230  3e-59  Ralstonia eutropha JMP134  Bacteria  normal  0.0588457  n/a   
 
 
-
 
NC_008825  Mpe_A0339  molybdate metabolism transcriptional regulator  39.76 
 
 
358 aa  227  3e-58  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0552  molybdate metabolism transcriptional regulator  36.16 
 
 
373 aa  222  8e-57  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.269597 
 
 
-
 
NC_008825  Mpe_A3707  periplasmic-binding protein  36.83 
 
 
361 aa  217  2e-55  Methylibium petroleiphilum PM1  Bacteria  normal  0.337443  normal  0.775197 
 
 
-
 
NC_009485  BBta_3840  molybdate metabolism transcriptional regulator  35.03 
 
 
361 aa  210  3e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335089  normal  0.579265 
 
 
-
 
NC_007951  Bxe_A0967  molybdate metabolism transcriptional regulator  36.83 
 
 
359 aa  209  7e-53  Burkholderia xenovorans LB400  Bacteria  normal  0.930984  normal 
 
 
-
 
NC_010681  Bphyt_3020  transcriptional regulator of molybdate metabolism, LysR family  36.53 
 
 
359 aa  206  4e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0475131  normal  0.0124041 
 
 
-
 
NC_010682  Rpic_2243  transcriptional regulator of molybdate metabolism, LysR family  34.29 
 
 
366 aa  204  3e-51  Ralstonia pickettii 12J  Bacteria  normal  0.963081  normal 
 
 
-
 
NC_007347  Reut_A0932  regulatory protein, LysR  35.28 
 
 
365 aa  203  4e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.658319  n/a   
 
 
-
 
NC_012856  Rpic12D_1919  transcriptional regulator of molybdate metabolism, LysR family  34.41 
 
 
366 aa  203  5e-51  Ralstonia pickettii 12D  Bacteria  normal  0.360263  normal  0.895882 
 
 
-
 
NC_010084  Bmul_2363  molybdate metabolism transcriptional regulator  36.09 
 
 
368 aa  201  1.9999999999999998e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0730  molybdate metabolism transcriptional regulator  37.35 
 
 
360 aa  201  1.9999999999999998e-50  Burkholderia phymatum STM815  Bacteria  normal  normal  0.739883 
 
 
-
 
NC_010551  BamMC406_0910  molybdate metabolism transcriptional regulator  35.78 
 
 
368 aa  197  3e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  0.527444  normal  0.0178578 
 
 
-
 
NC_008390  Bamb_0898  molybdate metabolism transcriptional regulator  35.78 
 
 
368 aa  197  3e-49  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0555  molybdate metabolism transcriptional regulator  37.04 
 
 
368 aa  196  6e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.601772  n/a   
 
 
-
 
NC_008542  Bcen2424_1034  molybdate metabolism transcriptional regulator  37.04 
 
 
368 aa  196  6e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4147  molybdate metabolism transcriptional regulator  35.78 
 
 
368 aa  196  7e-49  Burkholderia sp. 383  Bacteria  normal  0.70321  normal 
 
 
-
 
NC_010508  Bcenmc03_0993  molybdate metabolism transcriptional regulator  37.04 
 
 
368 aa  195  1e-48  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0233787  normal 
 
 
-
 
NC_007651  BTH_I1625  molybdate transport repressor  36.39 
 
 
368 aa  194  2e-48  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2092  hypothetical protein  33.33 
 
 
366 aa  194  3e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  0.306178  normal 
 
 
-
 
NC_007973  Rmet_0896  molybdate metabolism transcriptional regulator  33.89 
 
 
365 aa  194  3e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0446  molybdate transport repressor  36.09 
 
 
344 aa  190  2.9999999999999997e-47  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3008  regulatory protein  36.09 
 
 
344 aa  190  2.9999999999999997e-47  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2591  molybdate transport repressor  36.09 
 
 
359 aa  190  2.9999999999999997e-47  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0963  molybdate transport repressor  36.09 
 
 
359 aa  190  2.9999999999999997e-47  Burkholderia mallei NCTC 10229  Bacteria  normal  0.386261  n/a   
 
 
-
 
NC_009074  BURPS668_2898  LysR family transcriptional regulator  36.09 
 
 
359 aa  190  2.9999999999999997e-47  Burkholderia pseudomallei 668  Bacteria  normal  0.392199  n/a   
 
 
-
 
NC_009076  BURPS1106A_2960  LysR family transcriptional regulator  36.09 
 
 
359 aa  190  2.9999999999999997e-47  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0184  molybdate transport repressor  36.09 
 
 
359 aa  190  2.9999999999999997e-47  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2967  transcriptional regulator of molybdate metabolism, LysR family  34.25 
 
 
353 aa  159  8e-38  Methylobacterium populi BJ001  Bacteria  normal  0.23709  normal 
 
 
-
 
NC_008751  Dvul_0382  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  38.49 
 
 
650 aa  156  7e-37  Desulfovibrio vulgaris DP4  Bacteria  normal  0.690457  normal 
 
 
-
 
NC_010172  Mext_3479  regulatory protein LysR  35.54 
 
 
373 aa  154  4e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1335  molybdate metabolism transcriptional regulator  31.11 
 
 
340 aa  153  5e-36  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3075  transcriptional regulator of molybdate metabolism, LysR family  35.66 
 
 
346 aa  151  2e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0506443  normal 
 
 
-
 
NC_009943  Dole_0684  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  36.61 
 
 
648 aa  150  3e-35  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2849  regulatory protein LysR  34.97 
 
 
345 aa  150  4e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.312034  normal 
 
 
-
 
NC_011757  Mchl_3787  transcriptional regulator, LysR family  34.94 
 
 
358 aa  149  6e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.387361 
 
 
-
 
NC_010172  Mext_3806  regulatory protein LysR  35.35 
 
 
347 aa  143  5e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.44955  normal 
 
 
-
 
NC_011757  Mchl_0222  transcriptional regulator of molybdate metabolism, LysR family  35.4 
 
 
347 aa  143  5e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1164  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  40.25 
 
 
655 aa  143  5e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.811833  hitchhiker  0.00369459 
 
 
-
 
NC_011769  DvMF_1797  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.04 
 
 
655 aa  142  9.999999999999999e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.984095 
 
 
-
 
NC_010424  Daud_1894  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  39.22 
 
 
640 aa  141  1.9999999999999998e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.116253  n/a   
 
 
-
 
NC_007519  Dde_3228  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  38.33 
 
 
666 aa  140  3e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0210  transcriptional regulator of molybdate metabolism, LysR family  35.67 
 
 
348 aa  140  3e-32  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1391  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  32.93 
 
 
635 aa  139  7e-32  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1821  putative molybdate-binding protein  32.52 
 
 
294 aa  136  6.0000000000000005e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_24590  molybdenum cofactor synthesis domain protein  35.63 
 
 
645 aa  136  8e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0447  molybdenum cofactor synthesis domain protein  35.24 
 
 
642 aa  135  9.999999999999999e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.583292  normal 
 
 
-
 
NC_010003  Pmob_0374  molybdenum cofactor synthesis domain-containing protein  34.91 
 
 
632 aa  134  3e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.858069  n/a   
 
 
-
 
NC_011830  Dhaf_4561  DNA binding domain protein, excisionase family  40.1 
 
 
335 aa  132  6.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000373649  n/a   
 
 
-
 
NC_008554  Sfum_0615  molybdenum cofactor synthesis domain-containing protein  33.91 
 
 
651 aa  132  1.0000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1772  molybdenum cofactor synthesis domain protein  34.02 
 
 
649 aa  129  6e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2110  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  40.7 
 
 
649 aa  129  7.000000000000001e-29  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0934426 
 
 
-
 
NC_008609  Ppro_1453  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.45 
 
 
652 aa  127  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0812  DNA binding domain protein, excisionase family  33.95 
 
 
308 aa  127  3e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_1158  DNA binding domain protein, excisionase family  39.74 
 
 
320 aa  127  4.0000000000000003e-28  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.000000000597249  n/a   
 
 
-
 
NC_008346  Swol_0801  molybdenum cofactor biosynthesis protein  32.62 
 
 
639 aa  125  1e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1676  molybdenum cofactor synthesis domain protein  32.79 
 
 
633 aa  125  1e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0985  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  36.65 
 
 
644 aa  125  1e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.587268  n/a   
 
 
-
 
NC_012793  GWCH70_1737  DNA binding domain protein, excisionase family  32.84 
 
 
315 aa  124  2e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3952  DNA binding domain-containing protein  35.15 
 
 
317 aa  122  7e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  0.581977  normal 
 
 
-
 
NC_009767  Rcas_1861  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.12 
 
 
647 aa  123  7e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.72567 
 
 
-
 
NC_011729  PCC7424_0346  transcriptional regulator of molybdate metabolism, XRE family  33.96 
 
 
377 aa  122  9e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013522  Taci_0881  molybdenum cofactor synthesis domain protein  38.46 
 
 
624 aa  122  9.999999999999999e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.542033  n/a   
 
 
-
 
NC_007498  Pcar_0674  molybdate-binding domain-containing protein  35.18 
 
 
304 aa  121  1.9999999999999998e-26  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.95042e-17  n/a   
 
 
-
 
NC_011894  Mnod_1400  transcriptional regulator of molybdate metabolism, LysR family  36.33 
 
 
339 aa  119  9e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.306238  n/a   
 
 
-
 
NC_009253  Dred_2878  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  38.26 
 
 
644 aa  119  9.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1557  molybdate-binding protein  37 
 
 
317 aa  117  3e-25  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0083  molybdenum cofactor synthesis domain-containing protein  33.33 
 
 
655 aa  117  3e-25  Caldivirga maquilingensis IC-167  Archaea  normal  0.536917  normal  0.152284 
 
 
-
 
NC_005957  BT9727_0190  molybdate-binding protein  32 
 
 
315 aa  117  3.9999999999999997e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0223  molybdopterin biosynthesis protein, putative  32 
 
 
315 aa  116  5e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4055  molybdate metabolism transcriptional regulator  35.1 
 
 
377 aa  116  5e-25  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00182658  normal  0.26319 
 
 
-
 
NC_007413  Ava_4042  molybdate metabolism transcriptional regulator  32.67 
 
 
376 aa  116  6.9999999999999995e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.805509  normal  0.419577 
 
 
-
 
NC_011658  BCAH187_A0246  putative molybdopterin biosynthesis protein  32.5 
 
 
306 aa  115  7.999999999999999e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0187  DNA binding domain-containing protein  31.5 
 
 
306 aa  115  1.0000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0194  molybdate-binding protein  31.5 
 
 
315 aa  115  1.0000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0204  molybdopterin biosynthesis protein  31.5 
 
 
306 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0205  molybdopterin biosynthesis protein  31.5 
 
 
306 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0222  putative molybdopterin biosynthesis protein  31.5 
 
 
306 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_3707  molybdate metabolism transcriptional regulator  34.95 
 
 
374 aa  114  2.0000000000000002e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.487138  normal 
 
 
-
 
NC_013216  Dtox_0019  DNA binding domain protein, excisionase family  34.16 
 
 
326 aa  113  5e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0119  excisionase/Xis, DNA-binding  33.84 
 
 
309 aa  112  1.0000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0369  DNA binding domain-containing protein  33.33 
 
 
308 aa  112  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.0000403691  n/a   
 
 
-
 
NC_014248  Aazo_3853  XRE family molybdate metabolism transcriptional regulator  34.13 
 
 
377 aa  112  1.0000000000000001e-23  'Nostoc azollae' 0708  Bacteria  normal  0.593506  n/a   
 
 
-
 
NC_009674  Bcer98_0201  DNA binding domain-containing protein  32 
 
 
305 aa  111  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0229  putative molybdopterin biosynthesis protein  31 
 
 
306 aa  111  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2050  MoeA domain protein domain I and II  33.33 
 
 
662 aa  110  3e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0839  molybdate metabolism transcriptional regulator  33.92 
 
 
339 aa  109  9.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5098  periplasmic molybdate-binding protein  30 
 
 
306 aa  108  1e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0664  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  31.82 
 
 
621 aa  107  4e-22  Methanospirillum hungatei JF-1  Archaea  normal  0.509419  normal 
 
 
-
 
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