Gene RSc2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2092 
Symbol 
ID1220933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2264082 
End bp2265182 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID637238487 
Producthypothetical protein 
Protein accessionNP_520213 
Protein GI17546811 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG1910] Periplasmic molybdate-binding protein/domain
[COG2005] N-terminal domain of molybdenum-binding protein 
TIGRFAM ID[TIGR00637] ModE molybdate transport repressor domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.306178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCC AGTTCGATGT GTTTCCGGTG GTCGGGCCGG ACGACAATCC CAGGGCCAAC 
GGCAAGGTGT TCCAGCTGCT GCGCGCGGTG CGCGAAACCG GCTCGCTGCA CCGCGCGGCC
AAGCAGATCG GCCTGTCCTA TCGCCACGCA TGGGGCGTGA TGCGCGGATG GGAAGACATG
CTCGGGCGGA CGCTGCTCGA CATGGAGCGC GGGCGCGGCG CCTCGCTCAC CCTGTTCGGC
GAGCGCATGC TGCGCGCGGA GATGCGGCTG CACGAGCAGA TCGATCCGCT GTTGCGGCAG
GCAACGGGAC AGTTCCTGTC GGAACTGGAA GACGCCGCGC AGCCGCAGGC GCGCATCCGC
TTTTCCGGCA GCCATGACCC GGCGGTCGAA GTGCTGGCGC AGGTCTTTGC CGGCCAGGCC
GACGCCGCGA ACCTGGACAC GGTGTTTTGC AGCGCCGTCG AGGGCCTGAT CTGCCTGCAG
GAAAAGCAGT GCGAGGTGGC CGGCTTCTAC GTGGCGCCGC AGCAGGGCAG CGGCTCGATC
GCGCACCAGA CCCTGCGCAA GTGGCTGCGG CCCACCGCGG TGCGGCTGAT CGCGCTGGCC
GACCGGGAGC AGGGGCTGAT GATGTCGGCG CAGTGGGCCG GGCGCGTGCA GTCGCTGACC
GACCTGGTGC GCACCCGCGC CCGCTTCATC AACCGCCAGC GCAGTTCCGG CACGCGCCTG
CTGTTCGACC AGCTGCTGGT GGCCGAGGGC CTGTACCCCG ACCAGATCCA CGGCTATGAC
GAGCAGGAAT TCTCCAGCGA CAAGGTCGCG GAAGCGGTGC AGGCGGGCCG CGCCGACGTC
GGCTTCGGCC TGCGCCCGGG CGCCGAAGCG CACGGCCTGC ACTTCGTGCC GCTCACGCGC
GAGACGTACT ACCTCGCGGT GCGCCGCAAC GACGCCATGG CGCCCTGGGT GCGCGAGCTG
ACCGAGCGCA TCGGCTCGCC CGCCTTCCGC GCAGGACTGG ACCACCTGGC CGGCTACCGC
GCCCCCGAGC ACGTCGTGCT GACGACCGCC GAACAGGCGC TGCCCTGGCA CGCCGACGAG
CCCCGGGCGG CCGCGCGGTA A
 
Protein sequence
MTFQFDVFPV VGPDDNPRAN GKVFQLLRAV RETGSLHRAA KQIGLSYRHA WGVMRGWEDM 
LGRTLLDMER GRGASLTLFG ERMLRAEMRL HEQIDPLLRQ ATGQFLSELE DAAQPQARIR
FSGSHDPAVE VLAQVFAGQA DAANLDTVFC SAVEGLICLQ EKQCEVAGFY VAPQQGSGSI
AHQTLRKWLR PTAVRLIALA DREQGLMMSA QWAGRVQSLT DLVRTRARFI NRQRSSGTRL
LFDQLLVAEG LYPDQIHGYD EQEFSSDKVA EAVQAGRADV GFGLRPGAEA HGLHFVPLTR
ETYYLAVRRN DAMAPWVREL TERIGSPAFR AGLDHLAGYR APEHVVLTTA EQALPWHADE
PRAAAR