223 homologs were found in PanDaTox collection
for query gene Mchl_3787 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_3787  transcriptional regulator, LysR family  100 
 
 
358 aa  702    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.387361 
 
 
-
 
NC_010172  Mext_3479  regulatory protein LysR  96.09 
 
 
373 aa  622  1e-177  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0210  transcriptional regulator of molybdate metabolism, LysR family  75.84 
 
 
348 aa  479  1e-134  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3806  regulatory protein LysR  68.02 
 
 
347 aa  459  9.999999999999999e-129  Methylobacterium extorquens PA1  Bacteria  normal  0.44955  normal 
 
 
-
 
NC_011757  Mchl_0222  transcriptional regulator of molybdate metabolism, LysR family  67.73 
 
 
347 aa  457  1e-127  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1400  transcriptional regulator of molybdate metabolism, LysR family  59.88 
 
 
339 aa  350  2e-95  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.306238  n/a   
 
 
-
 
NC_010511  M446_0839  molybdate metabolism transcriptional regulator  59.01 
 
 
339 aa  332  4e-90  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2967  transcriptional regulator of molybdate metabolism, LysR family  46.73 
 
 
353 aa  263  3e-69  Methylobacterium populi BJ001  Bacteria  normal  0.23709  normal 
 
 
-
 
NC_011757  Mchl_3075  transcriptional regulator of molybdate metabolism, LysR family  46.42 
 
 
346 aa  258  1e-67  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0506443  normal 
 
 
-
 
NC_010172  Mext_2849  regulatory protein LysR  46.93 
 
 
345 aa  254  1.0000000000000001e-66  Methylobacterium extorquens PA1  Bacteria  normal  0.312034  normal 
 
 
-
 
NC_009379  Pnuc_1335  molybdate metabolism transcriptional regulator  32.21 
 
 
340 aa  177  2e-43  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0552  molybdate metabolism transcriptional regulator  38.14 
 
 
373 aa  169  5e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.269597 
 
 
-
 
NC_007948  Bpro_1757  molybdate metabolism transcriptional regulator  38.92 
 
 
371 aa  168  1e-40  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_007347  Reut_A0616  molybdate metabolism transcriptional regulator  38.77 
 
 
365 aa  166  5.9999999999999996e-40  Ralstonia eutropha JMP134  Bacteria  normal  0.0588457  n/a   
 
 
-
 
NC_010551  BamMC406_0910  molybdate metabolism transcriptional regulator  36.95 
 
 
368 aa  165  1.0000000000000001e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  0.527444  normal  0.0178578 
 
 
-
 
NC_008390  Bamb_0898  molybdate metabolism transcriptional regulator  36.95 
 
 
368 aa  165  1.0000000000000001e-39  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0993  molybdate metabolism transcriptional regulator  36.61 
 
 
368 aa  165  1.0000000000000001e-39  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0233787  normal 
 
 
-
 
NC_008060  Bcen_0555  molybdate metabolism transcriptional regulator  36.27 
 
 
368 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.601772  n/a   
 
 
-
 
NC_008542  Bcen2424_1034  molybdate metabolism transcriptional regulator  36.27 
 
 
368 aa  164  2.0000000000000002e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3016  transcriptional regulator of molybdate metabolism, LysR family  38.17 
 
 
370 aa  164  2.0000000000000002e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2363  molybdate metabolism transcriptional regulator  35.93 
 
 
368 aa  164  3e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4147  molybdate metabolism transcriptional regulator  36.7 
 
 
368 aa  163  4.0000000000000004e-39  Burkholderia sp. 383  Bacteria  normal  0.70321  normal 
 
 
-
 
NC_008825  Mpe_A3707  periplasmic-binding protein  37.19 
 
 
361 aa  161  1e-38  Methylibium petroleiphilum PM1  Bacteria  normal  0.337443  normal  0.775197 
 
 
-
 
NC_008825  Mpe_A0339  molybdate metabolism transcriptional regulator  40.27 
 
 
358 aa  161  2e-38  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0203  transcriptional regulator of molybdate metabolism, LysR family  37.7 
 
 
374 aa  160  4e-38  Thauera sp. MZ1T  Bacteria  normal  0.433996  n/a   
 
 
-
 
NC_008781  Pnap_1508  molybdate metabolism transcriptional regulator  37.95 
 
 
375 aa  159  7e-38  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0967  molybdate metabolism transcriptional regulator  35.25 
 
 
359 aa  158  1e-37  Burkholderia xenovorans LB400  Bacteria  normal  0.930984  normal 
 
 
-
 
NC_007651  BTH_I1625  molybdate transport repressor  39 
 
 
368 aa  157  2e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3020  transcriptional regulator of molybdate metabolism, LysR family  34.92 
 
 
359 aa  157  4e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0475131  normal  0.0124041 
 
 
-
 
NC_008785  BMASAVP1_A2591  molybdate transport repressor  39.39 
 
 
359 aa  156  4e-37  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0963  molybdate transport repressor  39.39 
 
 
359 aa  156  4e-37  Burkholderia mallei NCTC 10229  Bacteria  normal  0.386261  n/a   
 
 
-
 
NC_009074  BURPS668_2898  LysR family transcriptional regulator  39.39 
 
 
359 aa  156  4e-37  Burkholderia pseudomallei 668  Bacteria  normal  0.392199  n/a   
 
 
-
 
NC_009076  BURPS1106A_2960  LysR family transcriptional regulator  39.39 
 
 
359 aa  156  4e-37  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0184  molybdate transport repressor  39.39 
 
 
359 aa  156  4e-37  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0730  molybdate metabolism transcriptional regulator  36.12 
 
 
360 aa  156  6e-37  Burkholderia phymatum STM815  Bacteria  normal  normal  0.739883 
 
 
-
 
NC_006348  BMA0446  molybdate transport repressor  40 
 
 
344 aa  153  5e-36  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3008  regulatory protein  40 
 
 
344 aa  153  5e-36  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2870  molybdate metabolism transcriptional regulator  34.94 
 
 
372 aa  153  5e-36  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3130  molybdate metabolism transcriptional regulator  37.46 
 
 
373 aa  147  3e-34  Acidovorax sp. JS42  Bacteria  normal  0.839309  normal  0.445387 
 
 
-
 
NC_011992  Dtpsy_2477  transcriptional regulator of molybdate metabolism, LysR family  37.17 
 
 
373 aa  145  1e-33  Acidovorax ebreus TPSY  Bacteria  normal  0.497113  n/a   
 
 
-
 
NC_009485  BBta_3840  molybdate metabolism transcriptional regulator  33.87 
 
 
361 aa  143  6e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335089  normal  0.579265 
 
 
-
 
NC_010524  Lcho_1822  molybdate metabolism transcriptional regulator  37.22 
 
 
386 aa  143  6e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00250223 
 
 
-
 
NC_009439  Pmen_0386  molybdate metabolism transcriptional regulator  35.65 
 
 
362 aa  137  4e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2092  hypothetical protein  32.4 
 
 
366 aa  134  1.9999999999999998e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.306178  normal 
 
 
-
 
NC_007973  Rmet_0896  molybdate metabolism transcriptional regulator  33.85 
 
 
365 aa  135  1.9999999999999998e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2243  transcriptional regulator of molybdate metabolism, LysR family  33.44 
 
 
366 aa  133  3.9999999999999996e-30  Ralstonia pickettii 12J  Bacteria  normal  0.963081  normal 
 
 
-
 
NC_012791  Vapar_1577  transcriptional regulator of molybdate metabolism, LysR family  36.81 
 
 
369 aa  133  5e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1164  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  54.68 
 
 
655 aa  133  5e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.811833  hitchhiker  0.00369459 
 
 
-
 
NC_012856  Rpic12D_1919  transcriptional regulator of molybdate metabolism, LysR family  32.57 
 
 
366 aa  129  9.000000000000001e-29  Ralstonia pickettii 12D  Bacteria  normal  0.360263  normal  0.895882 
 
 
-
 
NC_013165  Shel_24590  molybdenum cofactor synthesis domain protein  36.67 
 
 
645 aa  127  3e-28  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0932  regulatory protein, LysR  32.33 
 
 
365 aa  126  5e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.658319  n/a   
 
 
-
 
NC_008825  Mpe_A2224  molybdate metabolism transcriptional regulator  33.61 
 
 
375 aa  123  5e-27  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1772  molybdenum cofactor synthesis domain protein  50.36 
 
 
649 aa  120  3e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0083  molybdenum cofactor synthesis domain-containing protein  38 
 
 
655 aa  118  9.999999999999999e-26  Caldivirga maquilingensis IC-167  Archaea  normal  0.536917  normal  0.152284 
 
 
-
 
NC_008609  Ppro_1453  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  42.11 
 
 
652 aa  117  3e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1861  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  55.17 
 
 
647 aa  117  3e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.72567 
 
 
-
 
NC_010424  Daud_1894  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.37 
 
 
640 aa  116  5e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.116253  n/a   
 
 
-
 
NC_008340  Mlg_2745  DNA binding domain-containing protein  41.46 
 
 
300 aa  115  1.0000000000000001e-24  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3228  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  40.62 
 
 
666 aa  115  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0684  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.99 
 
 
648 aa  115  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_0991  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  36.61 
 
 
637 aa  112  1.0000000000000001e-23  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.0710453 
 
 
-
 
NC_008751  Dvul_0382  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  40.11 
 
 
650 aa  110  5e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.690457  normal 
 
 
-
 
NC_013173  Dbac_0985  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  44.53 
 
 
644 aa  108  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.587268  n/a   
 
 
-
 
NC_010525  Tneu_0843  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  37.9 
 
 
637 aa  108  2e-22  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.505015  normal 
 
 
-
 
NC_009073  Pcal_1190  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  39.11 
 
 
638 aa  108  2e-22  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_010718  Nther_0447  molybdenum cofactor synthesis domain protein  40.49 
 
 
642 aa  107  3e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.583292  normal 
 
 
-
 
NC_010003  Pmob_0374  molybdenum cofactor synthesis domain-containing protein  31.47 
 
 
632 aa  105  1e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.858069  n/a   
 
 
-
 
NC_013223  Dret_2110  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  45.6 
 
 
649 aa  104  2e-21  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0934426 
 
 
-
 
NC_009376  Pars_1859  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  36.61 
 
 
639 aa  105  2e-21  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.693636 
 
 
-
 
NC_008346  Swol_1821  putative molybdate-binding protein  30.93 
 
 
294 aa  104  3e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1797  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  38.1 
 
 
655 aa  103  4e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.984095 
 
 
-
 
NC_010320  Teth514_1391  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  47.79 
 
 
635 aa  103  6e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0801  molybdenum cofactor biosynthesis protein  33.03 
 
 
639 aa  102  8e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0615  molybdenum cofactor synthesis domain-containing protein  43.15 
 
 
651 aa  102  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1557  molybdate-binding protein  38.51 
 
 
317 aa  101  2e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0881  molybdenum cofactor synthesis domain protein  45.53 
 
 
624 aa  101  2e-20  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.542033  n/a   
 
 
-
 
NC_013517  Sterm_1676  molybdenum cofactor synthesis domain protein  35.38 
 
 
633 aa  100  4e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0920  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  45 
 
 
644 aa  100  5e-20  Ammonifex degensii KC4  Bacteria  normal  0.0353995  n/a   
 
 
-
 
NC_009943  Dole_0369  DNA binding domain-containing protein  34.72 
 
 
308 aa  94.4  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.0000403691  n/a   
 
 
-
 
NC_007498  Pcar_0674  molybdate-binding domain-containing protein  34.54 
 
 
304 aa  90.5  4e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.95042e-17  n/a   
 
 
-
 
NC_007519  Dde_0119  excisionase/Xis, DNA-binding  34.85 
 
 
309 aa  89.7  7e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0201  DNA binding domain-containing protein  30.18 
 
 
305 aa  89  1e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0187  DNA binding domain-containing protein  29.59 
 
 
306 aa  89  1e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0190  molybdate-binding protein  30.18 
 
 
315 aa  88.2  2e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0246  putative molybdopterin biosynthesis protein  29.59 
 
 
306 aa  88.2  2e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0223  molybdopterin biosynthesis protein, putative  30.18 
 
 
315 aa  87.8  3e-16  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4561  DNA binding domain protein, excisionase family  40.46 
 
 
335 aa  87.8  3e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000373649  n/a   
 
 
-
 
NC_011772  BCG9842_B5098  periplasmic molybdate-binding protein  29.59 
 
 
306 aa  87.8  3e-16  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0229  putative molybdopterin biosynthesis protein  30.18 
 
 
306 aa  87.4  3e-16  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2878  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  43.67 
 
 
644 aa  87.4  3e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1699  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  31.55 
 
 
616 aa  87  4e-16  Methanococcus vannielii SB  Archaea  normal  0.128773  n/a   
 
 
-
 
NC_013411  GYMC61_0812  DNA binding domain protein, excisionase family  32.54 
 
 
308 aa  86.7  5e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008698  Tpen_1054  molybdenum cofactor synthesis domain-containing protein  31.58 
 
 
651 aa  86.7  7e-16  Thermofilum pendens Hrk 5  Archaea  normal  0.39347  n/a   
 
 
-
 
NC_006274  BCZK0194  molybdate-binding protein  29.59 
 
 
315 aa  86.3  9e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0204  molybdopterin biosynthesis protein  29.59 
 
 
306 aa  85.9  0.000000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0205  molybdopterin biosynthesis protein  29.59 
 
 
306 aa  85.9  0.000000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0222  putative molybdopterin biosynthesis protein  29.59 
 
 
306 aa  85.9  0.000000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009051  Memar_0405  putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein  33.7 
 
 
636 aa  85.5  0.000000000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011883  Ddes_2050  MoeA domain protein domain I and II  43.36 
 
 
662 aa  84.7  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0346  transcriptional regulator of molybdate metabolism, XRE family  33.75 
 
 
377 aa  84  0.000000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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