| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3787 |
|---|
| Symbol | |
|---|
| ID | 7116982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 4000832 |
|---|
| End bp | 4001908 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643526523 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002422534 |
|---|
| Protein GI | 218531718 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.387361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGACA GCTATGACGT CATCAATATG AATCAGGATT CCGAAGAGGC GGCCGTCTCT
GTCGTCCTCG GCCTGGGCGG CACGCTTCGG ATCGGCACGA GCGCGCTCAC GGTGTCCGAC
CTGACGGTGA TGTTCGACGC GATCACGCGG ACCGGCTCGG TGCAGGGCTT TGCCGACGCC
CTAGGCCTGT CCTATCGCGC GGCCTGGGCG CGCCTCCAGG CCTACGAGAC GGCGCTCGGC
CGGCCCCTGG TATGCAAGAC ACGTGGGCAC GGCACCGCCC TGACGGAGTT CGGGGCCGCC
TTGGCGGACG CCTTCACCGC CGCCTCGGCG GCCTTAGAGG CCAGCCTCGG CCGCGAGACC
CGCGCCGTCG AGCATCGCCT GCGCCATCTC ATGAGCGGCG GGGCGGGAGC ACTGACACTG
GCCGCGAGCC ACGATCCGTT GCTGGTCGAG GTCCTGACCG AGGTCATGAG CGGCGAACCG
GGTGCAGAGA CGGGTGTCGA ACTCTCCGTG ACGGGCAGCA GCGCGGCGGT GCAGCGCCTC
CTCGAGGGCG GAGCCGATGC GGCGGGCTTC CATTGCGGGG CTCTCGCGCC GGAAGCGGCG
GGCGCTCCGT TCTCCGCGAT CAATGCCGGC GCCGGCCTCG TGCTGCACCC CCTGTTCGAG
CGCGAGCAGG GCCTGCTGCT GGCCCCCGGC AACCCGCGCG GCATCCGCAC GCTGGCCGAC
CTGACCGCGC CCGGCCTGCG CTACGTCAAC CGCCAGAAGG GATCGGGCAC GCGGGACTGG
TTCGACCGCA TGCTGGCGCA GGCCGGCCTG CCGGCTGCCG CGATCCACGG CTACACGGTC
GAGGAGTTCA CCCATCAGGC GGTCGCGGCG GTCATCGCCT GCGGCGCGGC GGATGCGGGA
CTCGGTGTAC GGGCGGCGGC CGACCGGCTC GGCCTCGATT TCCTCTCGGT CGGCTGGGAG
ACCTATTATC TCGCCGCCAG CCGCTCCCTC GCCAGCCCGG CGCTCGACGC CCTCGTCGTC
GCAGCGAGAC GGCGCGCGAG CCGCACCCCC GGCTACCGCG CCGCCGCGGA TCTTTGA
|
|---|
| Protein sequence | MDDSYDVINM NQDSEEAAVS VVLGLGGTLR IGTSALTVSD LTVMFDAITR TGSVQGFADA
LGLSYRAAWA RLQAYETALG RPLVCKTRGH GTALTEFGAA LADAFTAASA ALEASLGRET
RAVEHRLRHL MSGGAGALTL AASHDPLLVE VLTEVMSGEP GAETGVELSV TGSSAAVQRL
LEGGADAAGF HCGALAPEAA GAPFSAINAG AGLVLHPLFE REQGLLLAPG NPRGIRTLAD
LTAPGLRYVN RQKGSGTRDW FDRMLAQAGL PAAAIHGYTV EEFTHQAVAA VIACGAADAG
LGVRAAADRL GLDFLSVGWE TYYLAASRSL ASPALDALVV AARRRASRTP GYRAAADL
|
|---|
| |