13 homologs were found in PanDaTox collection
for query gene Rfer_1642 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_1642  hypothetical protein  100 
 
 		 110 aa  219  9.999999999999999e-57  Rhodoferax ferrireducens T118  Bacteria  normal  0.380275  n/a   
 
 
-
 
NC_010506  Swoo_2800  hypothetical protein  38.14 
 
 		 112 aa  52.8  0.000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.939106  normal  1 
 
 
-
 
NC_008345  Sfri_2525  hypothetical protein  29.52 
 
 		 109 aa  49.7  0.00002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1795  hypothetical protein  31.31 
 
 		 114 aa  48.9  0.00002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.7671  normal  1 
 
 
-
 
NC_009092  Shew_2344  hypothetical protein  36.17 
 
 		 111 aa  48.5  0.00003  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1750  hypothetical protein  38.38 
 
 		 114 aa  48.5  0.00003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.305243  n/a   
 
 
-
 
NC_008321  Shewmr4_1581  hypothetical protein  32.29 
 
 		 115 aa  45.1  0.0003  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.11841 
 
 
-
 
NC_013223  Dret_1277  iron-sulfur binding protein  31.78 
 
 		 438 aa  45.4  0.0003  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.000111137  normal  0.38005 
 
 
-
 
NC_008322  Shewmr7_1656  hypothetical protein  32.29 
 
 		 115 aa  43.9  0.0007  Shewanella sp. MR-7  Bacteria  normal  0.033888  hitchhiker  0.000247019 
 
 
-
 
NC_008577  Shewana3_1725  hypothetical protein  33.04 
 
 		 115 aa  43.9  0.0007  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.218111 
 
 
-
 
NC_011313  VSAL_II0726  membrane protein  28.57 
 
 		 110 aa  42.7  0.002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.870782  n/a   
 
 
-
 
NC_004347  SO_1947  hypothetical protein  31.19 
 
 		 114 aa  41.6  0.004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2254  hypothetical protein  30.85 
 
 		 119 aa  40.4  0.008  Shewanella putrefaciens CN-32  Bacteria  normal  0.486202  n/a   
 
 
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