14 homologs were found in PanDaTox collection
for query gene Rfer_1252 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_1252  hypothetical protein  100 
 
 		 141 aa  291  1e-78  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2655  hypothetical protein  54.23 
 
 		 142 aa  158  3e-38  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_007955  Mbur_1604  dTDP-4-dehydrorhamnose epimerase  43.66 
 
 		 145 aa  136  7.999999999999999e-32  Methanococcoides burtonii DSM 6242  Archaea  normal  0.679828  n/a   
 
 
-
 
NC_009976  P9211_12921  dTDP-4-dehydrorhamnose 3,5-epimerase  41.18 
 
 		 143 aa  114  5e-25  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.197327  hitchhiker  0.00628301 
 
 
-
 
NC_007298  Daro_1258  dTDP-4-dehydrorhamnose epimerase  41.61 
 
 		 158 aa  103  8e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1910  polysaccharide biosynthesis domain-containing protein  38.19 
 
 		 149 aa  90.9  6e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_007519  Dde_3696  polysaccharide biosynthesis domain-containing protein  36.11 
 
 		 173 aa  90.5  7e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_0875  polysaccharide biosynthesis domain-containing protein  35.71 
 
 		 165 aa  82.4  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2887  polysaccharide biosynthesis domain-containing protein  32.39 
 
 		 147 aa  77.8  0.00000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.749725  normal  1 
 
 
-
 
NC_011832  Mpal_2403  dTDP-4-dehydrorhamnose 3,5 epimerase  27.48 
 
 		 158 aa  70.1  0.00000000001  Methanosphaerula palustris E1-9c  Archaea  normal  0.930193  normal  1 
 
 
-
 
NC_009051  Memar_0185  dTDP-4-dehydrorhamnose 3,5-epimerase  23.13 
 
 		 158 aa  53.5  0.000001  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_2142  dTDP-4-dehydrorhamnose 3,5-epimerase  25.19 
 
 		 155 aa  44.7  0.0005  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_1213  dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme  22.45 
 
 		 154 aa  41.2  0.005  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_0259  dTDP-4-dehydrorhamnose 3,5-epimerase  24.81 
 
 		 153 aa  41.2  0.005  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
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