Gene Mbur_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1604 
Symbol 
ID3998691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1684563 
End bp1685000 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content38% 
IMG OID637959361 
ProductdTDP-4-dehydrorhamnose epimerase 
Protein accessionYP_566258 
Protein GI91773566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.679828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAG GGGTTATTGT AAACCCAGTA AAGATTATCA CTGGTGAAAA TGGCAACGTA 
ATGCATGCTT TAAAAGCAGA AGATGATTCA TATCATGGAT TTGGAGAAGC ATATTTTTCA
ACTGTCAACT GTGGAGCAAT AAAAGCATGG AAACGTCATC ATGAGATGAC CTTGAATATT
GTAGTACCAC AGGGAGAAAT AATGTTCGTA CTCTATGACG ATAGGCTTGA ATCCAACACT
CGTGGACAAA TAATGGAAAT CAAGCTGTCT ACAGAGAACT ACCAGAGGTT GACAATTCCA
CCAATGGTAT GGATGGGGTT CAAAGGTATG GGAAAAGATG CGAATATCCT TATAAACATT
GCAAACATTC AACATGATCC GAATGAGAGC GACCATCTGG ACTCCCACAA AAACAATATA
AATTATGATT GGGGATGA
 
Protein sequence
MIEGVIVNPV KIITGENGNV MHALKAEDDS YHGFGEAYFS TVNCGAIKAW KRHHEMTLNI 
VVPQGEIMFV LYDDRLESNT RGQIMEIKLS TENYQRLTIP PMVWMGFKGM GKDANILINI
ANIQHDPNES DHLDSHKNNI NYDWG