Gene Sden_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2655 
Symbol 
ID4019172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3187044 
End bp3187472 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content33% 
IMG OID637956699 
Producthypothetical protein 
Protein accessionYP_563657 
Protein GI91794006 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACG GAATTGTTAT TACTCGATTA AAGCGAATAT TAAATGAGAA AGGTGATATT 
TATCATGCTT TAAAAAATTC CGATGAAAGC TTTAGTTCAT TTGGTGAAGC ATATTTTTCT
AGTGTTCATT TAGATGATAT TAAAGGCTGG AAAAAACATA CGAAAATGAT TCTAAACTTA
GTTGTACCAG TTGGTAGCAT AAGATTTGTT TTCTATGACG ATAGATATGA AAGTAATTCG
TATGGTGAGT ATGTAGATGT CATAGCGTCT CCTGATAATT ATGTTCGACT AACAGTCCCT
GCTGGTGTCT GGGTTGCATT TCAAGGCGTT GGTTCTGGAT TGAATCTGTT ACTAAATATT
GCCAGTATTG AACATGATCC TTCAGAATCT ATTTCAGAGG CATTAAGTTA TATTCCTTAT
AAGTGGTAA
 
Protein sequence
MIDGIVITRL KRILNEKGDI YHALKNSDES FSSFGEAYFS SVHLDDIKGW KKHTKMILNL 
VVPVGSIRFV FYDDRYESNS YGEYVDVIAS PDNYVRLTVP AGVWVAFQGV GSGLNLLLNI
ASIEHDPSES ISEALSYIPY KW