Gene P9211_12921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12921 
Symbol 
ID5731750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1166796 
End bp1167227 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content32% 
IMG OID641285662 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001551177 
Protein GI159903833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.197327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00628301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATATAA GTAGCAGTCA AAAAATAATA CAAATGCCTC TAAAAAGAAT AGGAGTAGAA 
GGAGGAGATG TTCTACATGT ACTTAAATCA ACAGACAGAC AATATAATTG TTTTAATGAA
GCTTACTTCT CAATAATAAA GTCTGGATCA ATCAAAGCAT GGAAAAAGCA CCAAAGAATG
ACCCTTAACA TTGTCGTTCC TATAGGAAAT GTACAATTCA TATTTTATGA AGATCAAAAG
CTCATACTAA ATACCATAAT CGGAGAAGAT AACTACTGTT TACTGACTAT CAGACCTGGA
ATCTGGTTCG GATTTAAAGG TTTATCTGAA AGCGATAGTT ATATACTAAA TATTGCTGAC
ATTATTCATG ATGGCAATGA AGTGGAAAGA CAACCACTGA ATTTCCTTAA GTTCTTACCT
GTTCAAAAAT GA
 
Protein sequence
MDISSSQKII QMPLKRIGVE GGDVLHVLKS TDRQYNCFNE AYFSIIKSGS IKAWKKHQRM 
TLNIVVPIGN VQFIFYEDQK LILNTIIGED NYCLLTIRPG IWFGFKGLSE SDSYILNIAD
IIHDGNEVER QPLNFLKFLP VQK