5 homologs were found in PanDaTox collection
for query gene Psyr_1196 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007005  Psyr_1196  type III secretion protein HrpD  100 
 
 		 175 aa  352  2e-96  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.10264 
 
 
-
 
NC_004578  PSPTO_1385  type III secretion protein HrpD  76.57 
 
 		 176 aa  253  1.0000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_0027  hypothetical protein  49.12 
 
 		 177 aa  146  2.0000000000000003e-34  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_1900  type III secretion protein  30.98 
 
 		 187 aa  62.8  0.000000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_2196  type III secretion protein  34.78 
 
 		 210 aa  60.8  0.000000009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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