Gene PC1_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2196 
Symbol 
ID8133140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2526069 
End bp2526701 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID644865484 
Producttype III secretion protein 
Protein accessionYP_003017771 
Protein GI253688581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC AAGAGCACCG CAGGGCGTTG ACGCCGGGTG ACGCAACCGC GCTGGCATGG 
CTGACCTGGT GGGTAAAGGA TTGTTTGTTA CAGGCCGATC CCAGCTGGTG GAGCGGGAAG 
GTAGCGTTAC CCGAATCGCC GCAGCGCCGC GACTGGCTGC ATGTGAACGC CGAACAGCTT 
CATCGCCATT TCTCTCTGCC ACAGCGGTTG CCACCGGATC CGCTTGCTTC ACTCATGCAC 
ATCGGCGAGC TGGATACCGC GCAGCGGGAA ACGGTATTAC GCCTTATGGT GCGGGTTTGT 
CAGCCCATAC GTAACCCGGA TCGTGCTGAT GCCGAGGGCA TATGGTGTGA GCGGCTGGCA 
AAGGCATTGC GGCCTGGCTT ATGGCTACCG GCGGAGATGA CCTTTTCTGC GTCATCTGCC 
GCGCCATCGC TGTCGGAGTC CTCTGCAACC GGCTATCAGG ATGCATTGCT GCTGCTGCGT 
ATTCGTTATG GTGAAGTGTA CTGGTCACGT CTACGGCTGC TCTTTCCACG CGATTGGCCC 
GATCATCACC TTATCTCGGC GGTGTCATTG CCTGCCGCCA GACTCAATGC GCTGTGCGAT 
GCCCTGATCT GGAAAGCATC CGCGCCCGCA TAA
 
Protein sequence
MTTQEHRRAL TPGDATALAW LTWWVKDCLL QADPSWWSGK VALPESPQRR DWLHVNAEQL 
HRHFSLPQRL PPDPLASLMH IGELDTAQRE TVLRLMVRVC QPIRNPDRAD AEGIWCERLA 
KALRPGLWLP AEMTFSASSA APSLSESSAT GYQDALLLLR IRYGEVYWSR LRLLFPRDWP 
DHHLISAVSL PAARLNALCD ALIWKASAPA