| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1196 |
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| Symbol | |
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| ID | 3366690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1355915 |
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| End bp | 1356442 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637651537 |
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| Product | type III secretion protein HrpD |
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| Protein accession | YP_234288 |
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| Protein GI | 66044447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.10264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA CCGCCGAGGA CTATTGGACT CAGTGGTGGT GCAACCCCTG GCCTTGGGCG
CATCCAGGCT GGCAAAGCCG GTTCGCTGAG CGCTGCGGAC TGACCGTCAG CGACTGTGAA
GCGCTCATGG TCAGCCGTCA CGGCGTGTTT CTGCAGAGTG TCGGCATCAT GCCAAGTCAA
CCGCCAATGC CTGCAGAGCC GGTGTTGAAC TGGCTGGCGC TGACACCCGC GCAGCGTGAT
CAGGCGCTGG ATCTGGCGCA GCGCATCTGT TTTTCCCGTA ACGAAAGCGA CGGCGATGAC
GGGCAGTGGT GCTGGGCGCT GACCAAGGCG TTGCGCCCTG GTGTCTGGCT GGAGCTGGAG
CATGAAGATG CGCGCTTGCT GTTGGGTGCC TGGCTCGGGC CTGAGTATTG GTCGCGATTG
CGTCTGGCCT GGGCGCCCGA TGAGGTCGCC GAGAGGCCTT GCGCGGCCCC CGAAAATAAA
CTTCAGACGC TGTGGCAGGC TGTTCTATGG CGTGTCACCG CGGCCTGA
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| Protein sequence | MDLTAEDYWT QWWCNPWPWA HPGWQSRFAE RCGLTVSDCE ALMVSRHGVF LQSVGIMPSQ
PPMPAEPVLN WLALTPAQRD QALDLAQRIC FSRNESDGDD GQWCWALTKA LRPGVWLELE
HEDARLLLGA WLGPEYWSRL RLAWAPDEVA ERPCAAPENK LQTLWQAVLW RVTAA
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