5 homologs were found in PanDaTox collection
for query gene PSPTO_1385 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_1385  type III secretion protein HrpD  100 
 
 		 176 aa  356  9.999999999999999e-98  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1196  type III secretion protein HrpD  76.57 
 
 		 175 aa  273  9e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.10264 
 
 
-
 
NC_009439  Pmen_0027  hypothetical protein  45.03 
 
 		 177 aa  138  3e-32  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_1900  type III secretion protein  31.49 
 
 		 187 aa  67  0.0000000001  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_2196  type III secretion protein  33.33 
 
 		 210 aa  57.4  0.0000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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