12 homologs were found in PanDaTox collection
for query gene PputGB1_3723 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_3723  hypothetical protein  100 
 
 		 168 aa  342  2e-93  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.00883252  normal  1 
 
 
-
 
NC_009656  PSPA7_3407  hypothetical protein  64.24 
 
 		 184 aa  224  3e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.163111  n/a   
 
 
-
 
NC_007511  Bcep18194_B0729  XRE family transcriptional regulator  64.24 
 
 		 188 aa  215  2e-55  Burkholderia sp. 383  Bacteria  normal  0.495438  normal  0.182523 
 
 
-
 
NC_010552  BamMC406_4893  XRE family transcriptional regulator  63.03 
 
 		 185 aa  215  2e-55  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.000997693 
 
 
-
 
NC_008463  PA14_40210  hypothetical protein  61.82 
 
 		 184 aa  213  9.999999999999999e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.244823  normal  1 
 
 
-
 
NC_008391  Bamb_4376  XRE family transcriptional regulator  61.82 
 
 		 185 aa  212  1.9999999999999998e-54  Burkholderia ambifaria AMMD  Bacteria  normal  1  hitchhiker  0.00948369 
 
 
-
 
NC_010086  Bmul_3665  XRE family transcriptional regulator  63.64 
 
 		 185 aa  210  7e-54  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.855806  normal  1 
 
 
-
 
NC_008061  Bcen_3417  XRE family transcriptional regulator  61.82 
 
 		 188 aa  207  6e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.913782  n/a   
 
 
-
 
NC_008543  Bcen2424_4951  XRE family transcriptional regulator  61.82 
 
 		 188 aa  207  6e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.0587865 
 
 
-
 
NC_010515  Bcenmc03_5335  XRE family transcriptional regulator  61.21 
 
 		 188 aa  205  2e-52  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0324234 
 
 
-
 
NC_012850  Rleg_3527  transcriptional regulator, XRE family  45.18 
 
 		 178 aa  140  6e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00697962  normal  1 
 
 
-
 
NC_007492  Pfl01_2366  XRE family transcriptional regulator  59.65 
 
 		 117 aa  70.1  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.0934629 
 
 
-
 
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