12 homologs were found in PanDaTox collection
for query gene Bamb_4376 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008391  Bamb_4376  XRE family transcriptional regulator  100 
 
 		 185 aa  368  1e-101  Burkholderia ambifaria AMMD  Bacteria  normal  1  hitchhiker  0.00948369 
 
 
-
 
NC_010552  BamMC406_4893  XRE family transcriptional regulator  98.38 
 
 		 185 aa  363  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.000997693 
 
 
-
 
NC_008061  Bcen_3417  XRE family transcriptional regulator  85.95 
 
 		 188 aa  315  3e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.913782  n/a   
 
 
-
 
NC_008543  Bcen2424_4951  XRE family transcriptional regulator  85.95 
 
 		 188 aa  315  3e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.0587865 
 
 
-
 
NC_010086  Bmul_3665  XRE family transcriptional regulator  85.41 
 
 		 185 aa  315  3e-85  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.855806  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0729  XRE family transcriptional regulator  84.86 
 
 		 188 aa  313  7e-85  Burkholderia sp. 383  Bacteria  normal  0.495438  normal  0.182523 
 
 
-
 
NC_010515  Bcenmc03_5335  XRE family transcriptional regulator  85.41 
 
 		 188 aa  313  8e-85  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0324234 
 
 
-
 
NC_009656  PSPA7_3407  hypothetical protein  64.48 
 
 		 184 aa  233  8e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.163111  n/a   
 
 
-
 
NC_008463  PA14_40210  hypothetical protein  63.93 
 
 		 184 aa  233  2.0000000000000002e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.244823  normal  1 
 
 
-
 
NC_010322  PputGB1_3723  hypothetical protein  61.82 
 
 		 168 aa  212  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.00883252  normal  1 
 
 
-
 
NC_012850  Rleg_3527  transcriptional regulator, XRE family  46.86 
 
 		 178 aa  139  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00697962  normal  1 
 
 
-
 
NC_007492  Pfl01_2366  XRE family transcriptional regulator  70.59 
 
 		 117 aa  94.4  9e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.0934629 
 
 
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