Gene BamMC406_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4893 
Symbol 
ID6180222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand+ 
Start bp2040287 
End bp2040844 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content72% 
IMG OID641684646 
ProductXRE family transcriptional regulator 
Protein accessionYP_001811557 
Protein GI172063906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000997693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCT CGCCGCTTCA CACCCCGCCG CTCGGCCCGC AACTCAAGCG CTGGCGCGCG 
CTGCGCCGCG TGAAGCAGAG CCATGCGGCC GAGCTGTTCG GCGTCGCGCA ATCGACGATC 
TCGCGCTGGG AAGCCGGCAT CCAGCAGATG TCGCCCGACG AGCGCGCGAC GGCCGAGCGG 
CTGCTTGCCG CGCGTCTCGA TTCGGCCGGC GACCACGCGC TCGCGCGGCT GATCGCCAGC 
AGCACGGCCC GCATGCATCT CGTGTGCGAC CTCACGCATC GGCTGCTCGC CTGCTCGCCA 
TCGCGCGCGG CCGAGTTCTC GCGGCCGCTG CCGGCGTTGC TCGGTACCTC GCTATGGCGC 
TATGCATCGC CGGAAATCGT CCGCATGGAA GCCGCGCTCG ACCCGCTCGG CTGGCACGAT 
CGCGCGGGGC CGCCGAGCGT CGAGTTCGCG ACCGGCACCA ATGCGTCGCG CGTCGTGCCG 
ATCCGTGGCA GTACCTGCCG GTGGACGCGC ATGACGCTGT CGGACGGCTC GGCCGCGCGG 
CTCGTCGAAA CGCTGTAG
 
Protein sequence
MTTSPLHTPP LGPQLKRWRA LRRVKQSHAA ELFGVAQSTI SRWEAGIQQM SPDERATAER 
LLAARLDSAG DHALARLIAS STARMHLVCD LTHRLLACSP SRAAEFSRPL PALLGTSLWR 
YASPEIVRME AALDPLGWHD RAGPPSVEFA TGTNASRVVP IRGSTCRWTR MTLSDGSAAR 
LVETL