Gene Bamb_4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4376 
Symbol 
ID4313270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1312686 
End bp1313243 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content72% 
IMG OID638152216 
ProductXRE family transcriptional regulator 
Protein accessionYP_776262 
Protein GI115359124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00948369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCT CGCCGCTTCA CACCCCGCCG CTCGGCCCGC AACTCAAGCG CTGGCGCACG 
CTGCGCCGCG TGAAGCAGAG CCATGCAGCC GAGCTGTTCG GCGTCGCGCA ATCGACAATC
TCGCGCTGGG AAGCCGGCAT CCAGCAGATG TCGCCCGACG AGCGCGCAAC GGCCGAGCGG
CTGCTTGCCG CGCGTCTCGA TTCGGCCGGC GACCACGCGC TCGCGCGGCT GATCGCGAGC
AGCACGGCCC GCATGCATCT CGTGTGCGAC CTCACGCATC GCTTGCTCGC CTGCGCGCCG
TCGCGCGCGG CAGAGTTCTC GCGGCCGCTG CCGGCCTTGC TCGGTACCTC GCTGTGGCGC
TATGCGTCGC CGGAAATCGT GCGCATGGAA GCCGCGCTCG ACCCGCTCGG CTGGCACGAT
CGCGCGGGGC CGCCGAGCGT CGAATTCGCG ACCGGCATCA ATGCGTCGCG CGTCGTGCCG
ATCCGCGGCA GCACCTGCCG GTGGACGCGC ATGACGCTGT CGGACGGCTC CGCCGCGCGG
CTCGTCGAAA CGCTGTAG
 
Protein sequence
MTTSPLHTPP LGPQLKRWRT LRRVKQSHAA ELFGVAQSTI SRWEAGIQQM SPDERATAER 
LLAARLDSAG DHALARLIAS STARMHLVCD LTHRLLACAP SRAAEFSRPL PALLGTSLWR
YASPEIVRME AALDPLGWHD RAGPPSVEFA TGINASRVVP IRGSTCRWTR MTLSDGSAAR
LVETL