6 homologs were found in PanDaTox collection
for query gene Pnuc_1248 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009379  Pnuc_1248  hypothetical protein  100 
 
 
231 aa  454  1e-127  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.191088  n/a   
 
 
-
 
NC_009379  Pnuc_2072  hypothetical protein  82.68 
 
 
231 aa  381  1e-105  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0960  hypothetical protein  30.99 
 
 
243 aa  107  2e-22  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.395999  normal 
 
 
-
 
NC_009379  Pnuc_0562  hypothetical protein  30.71 
 
 
235 aa  88.2  1e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1540  hypothetical protein  34.94 
 
 
152 aa  66.6  0.0000000003  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0415  outer membrane protein  32.77 
 
 
255 aa  45.1  0.0009  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
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