Gene Pnuc_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_2072 
Symbol 
ID5053952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp2139124 
End bp2139819 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID640472246 
Producthypothetical protein 
Protein accessionYP_001156847 
Protein GI145590250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT TAATTTCCCT GCTCTTTATT CTGTTTTCAG TGGGAGCTCT AGCGCAATCA 
ACCGATAGCC AAAAGAAATC CTTTGAAGGG TTTTATGCTC AAGCAGGAGT TGGCTATCAA 
ACAACTAACA TCACTTATTC TGGAGTGGTT CCTGGCGCAC CAAGTTATAT AAGTCTTTCG 
CCTGGGTCCA GCCCTTCTCA CGGCATTACC GGCAATGTTG GTGCCGGTTA TACCTATTCT 
ATAAACGATC GATTTTCAAT TGGAGCAGGC GCTGAATACT ACCCTGTTGT GGGCCCTCCA 
GGTAACTACA CATTAACCTC TTGTACACCA GGATGCTCTA CTGGAAATGG AAGTTATCAC 
ACGCAAAATA TGTACAACCT CTTCGTTACC CCCGGAATAT CAGTTGGAAA TGATGGCTTA 
GCCTATTTAA AGGCTGGTTA TACCCGCACT TCAGTTAAAA CTATGGTTCA AGGGGCGCTC 
CCAATTGCCG GAACAGTTTC TAATCCATCA GGCCCGTCTT TTGGTATTGG CTATAAGCAA 
TACATTGCTG GAAATATTTA TGGCTTTGCG GAATATAACT ATCAAATTTA TCAAAAGACT 
ACGACCATAT TTCAGGGCGC TAGTGGGCTA CTTCTGTACA ACTCCAATCA GTCTTCTGTA 
CAAAATTTGT TGGTTGGTCT CGGCTACAAG TTCTAG
 
Protein sequence
MKRLISLLFI LFSVGALAQS TDSQKKSFEG FYAQAGVGYQ TTNITYSGVV PGAPSYISLS 
PGSSPSHGIT GNVGAGYTYS INDRFSIGAG AEYYPVVGPP GNYTLTSCTP GCSTGNGSYH 
TQNMYNLFVT PGISVGNDGL AYLKAGYTRT SVKTMVQGAL PIAGTVSNPS GPSFGIGYKQ 
YIAGNIYGFA EYNYQIYQKT TTIFQGASGL LLYNSNQSSV QNLLVGLGYK F