Gene Pnuc_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0562 
Symbol 
ID5052780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp552152 
End bp552859 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID640470716 
Producthypothetical protein 
Protein accessionYP_001155346 
Protein GI145588749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAC TCAAATACAG CTACATGCCA GCGATACTGG CTCTACTTAT TTCAGCCAAT 
GTATACGCAG ATGCACAGTC AAACCCTTGG GTTGGTGCTT ATGGACAAAT TGGCGTAGGC 
TATGAGAGCT ACATCCCAAA AAATGCCAAT GGAACCACAA CCACTGCTTC TGGATACAGC 
TTCCCTAATG TTGCCTCTGC CAACCATGCC AATGGCCCAG CAGGAAACAT TGGGGTTGGA 
TATAACTTTG GAGCTGGAGA TAGCTTTGTA ATCGGATTAG GTGCAGCCCT TTACCCTGGA 
CACTCAAAAT CTGCGAGTTC AACACTAGTT ACTACCGTTG GTAATACTCC AGTAGTTGGA 
ACTGGAACAT ATGATGTTTC CAACGTATTT AGTTTTTCAC TTATTCCTGG GTATGTCATT 
GACAAAACGC ATCTCATCTA CGCTAAGGTT GGTTACGCTG GCTCAACAAT TAATGCAAAC 
TCAGCTGGGA ACTATCCTCA GCAAACTAAT AGAGTCAATG GCACTGTTTA CGGGTTGGGA 
TATAAGCAAT TCCTTCCAGA ATCGTCTATC TATTTTTTCG GCGAGGGAAA TTATGCGGTA 
AACAGAGCTA AATCAGTCTC TTTAATCACG GATAGTGGCT CAACTATTGC ATCAACAGCA 
AATGCTACTG GCTACGACAT TTTGATTGGC CTTGGTTACC ACTTCTAG
 
Protein sequence
MKSLKYSYMP AILALLISAN VYADAQSNPW VGAYGQIGVG YESYIPKNAN GTTTTASGYS 
FPNVASANHA NGPAGNIGVG YNFGAGDSFV IGLGAALYPG HSKSASSTLV TTVGNTPVVG 
TGTYDVSNVF SFSLIPGYVI DKTHLIYAKV GYAGSTINAN SAGNYPQQTN RVNGTVYGLG 
YKQFLPESSI YFFGEGNYAV NRAKSVSLIT DSGSTIASTA NATGYDILIG LGYHF