Gene Pnuc_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1248 
Symbol 
ID5053180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1313560 
End bp1314255 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID640471420 
Producthypothetical protein 
Protein accessionYP_001156027 
Protein GI145589430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.191088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT TATTTTTCGT AATCTTATGT ATTTTGTCTC TCAGCGCTCA TGCCCAATCT 
ACCGATGGTC AAAAAAGAAG TTTTGAAGGA TTCTACGGTC AGATTGGTGT AGGGTATCAA 
ATAACTAACA TCACTTATTC TGGGGTAGTT CCTGGGGCGC CCAGTAACAT CAGCCTTGCT 
CCTGGCTCAG GCCCTTCTTA TGGTATTACG GGGAATGTAG GTGCTGGCTA TACCTATTCT 
ATAAATGATA GATTTACTAT TGGAGCGGGT GCTGAGTATT ACCCGGTAGT AGGGCCTCCA 
GGAAATTACA CATTAACCTC CTGCACTCCT AGTTGCAGCA CTGGAAACGG AAGTTATCAC 
ACGCAAAATA TGTATAACCT ATTTGTTGCT CCGGGAGTGA CCTTAGGCGA AGATGGCTTG 
GCCTACTTAA AGGCTGGCTA TACCCGTGCT TCAGTGAAAA CCATGGTGCA AGGAGCACTA 
CCGATTGGCG GCACGGTCTC GAATCCACTA GGCCCATCTT TTGGTATAGG GTACAAGCAA 
TATCTTTCTG GAAATATTTA TGGTTTTGCT GAGTATAACT ATTTGATTTA TCAAAAGACG 
ACCACCCAAT TTCAGGGTAC TGGCGGGCTA ACGCTGTATA ACTCAAATCA GTCTTCTGTT 
CAAAATTTAG TTCTTGGGCT TGGGTATAAG TTTTAA
 
Protein sequence
MKYLFFVILC ILSLSAHAQS TDGQKRSFEG FYGQIGVGYQ ITNITYSGVV PGAPSNISLA 
PGSGPSYGIT GNVGAGYTYS INDRFTIGAG AEYYPVVGPP GNYTLTSCTP SCSTGNGSYH 
TQNMYNLFVA PGVTLGEDGL AYLKAGYTRA SVKTMVQGAL PIGGTVSNPL GPSFGIGYKQ 
YLSGNIYGFA EYNYLIYQKT TTQFQGTGGL TLYNSNQSSV QNLVLGLGYK F