Gene Pden_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0415 
Symbol 
ID4579461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp385901 
End bp386668 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID639767732 
Productouter membrane protein 
Protein accessionYP_914225 
Protein GI119383169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCTG TTCTTGTGAA AGCTTCCCTG ACCGCTGGGG CCGTGGCCTC GCTGGCCCTC 
GGCACGGCTC TGGCCGCGAA TGCGGGCGGA TACACGCCCC CTGTCGTTGA TACCGACGTC
ACGGCCCCGG TCGTCGAAAG CGCGCCGGTC GGCGATTGGG CGGGTGCCTA TGCCGGCCTG
ACGCTGGGCT ATGCCTTTGG CGGCGACGAC CGCGTCGGAT TCACCGAAGT CGACACGGGC
ACCTATCTGG GCGATGCCGG GAAACTTGAG CTTGGCGGCG CCAATGCGGG CCTGCATGTG
GGTTATCGCT GGCAAAGGGA TCGCTGGGTC TTCGGCCCCG AACTCGGCTT CGAGGCGGGC
AATATCAAGG ACACGATCAC CTTCGACAAT CAACTTGGCG GCTCGACCGA TGTCTCGTCG
AAGATCAGGA ACGTCCTCGC ACTGCGCCTG AAGACCGGCT ATGCGCTGCG TCCCGATCTT
CTGCTTTACG GCATCGCCGG CATCGCGCGC GCCGACGTCG AATACAAGGT TGCGGGCACC
GATGGCAGCG GCGGCTCGAT GAGCGAGAGC CGGGACTTCA AGAGCAATGG CTATATCGTC
GGCCTTGGCG TCGAGAGAAA GCTCAGCGAC CGCATGTCGG TGACGGGCGA ATATGAATAT
GCCAACTTCG GCAAGACCAC CCGGACTTTC CAGGTTGACG GAGGGGTCTC GACCCAGGCC
ACTCCTGATT ACCACAACGT GAAACTCGGC CTGAACTTCA AGTTCTGA
 
Protein sequence
MCAVLVKASL TAGAVASLAL GTALAANAGG YTPPVVDTDV TAPVVESAPV GDWAGAYAGL 
TLGYAFGGDD RVGFTEVDTG TYLGDAGKLE LGGANAGLHV GYRWQRDRWV FGPELGFEAG
NIKDTITFDN QLGGSTDVSS KIRNVLALRL KTGYALRPDL LLYGIAGIAR ADVEYKVAGT
DGSGGSMSES RDFKSNGYIV GLGVERKLSD RMSVTGEYEY ANFGKTTRTF QVDGGVSTQA
TPDYHNVKLG LNFKF