13 homologs were found in PanDaTox collection
for query gene Pnuc_0749 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009379  Pnuc_0749  hypothetical protein  100 
 
 
135 aa  272  1.0000000000000001e-72  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.110319  n/a   
 
 
-
 
NC_010531  Pnec_1071  hypothetical protein  84.38 
 
 
105 aa  115  3e-25  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0775685 
 
 
-
 
NC_007005  Psyr_2639  hypothetical protein  37.29 
 
 
154 aa  63.2  0.000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0562456  normal 
 
 
-
 
NC_010524  Lcho_0263  hypothetical protein  37.14 
 
 
158 aa  60.5  0.000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0324257 
 
 
-
 
NC_009512  Pput_3206  hypothetical protein  35.09 
 
 
152 aa  58.2  0.00000004  Pseudomonas putida F1  Bacteria  normal  normal  0.053039 
 
 
-
 
NC_010501  PputW619_2022  hypothetical protein  38.24 
 
 
152 aa  53.9  0.0000007  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1800  hypothetical protein  34.71 
 
 
271 aa  52.4  0.000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00000291935 
 
 
-
 
NC_009485  BBta_7190  hypothetical protein  37.14 
 
 
150 aa  45.4  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.60706  normal 
 
 
-
 
NC_011662  Tmz1t_3949  hypothetical protein  29.31 
 
 
153 aa  43.9  0.0008  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1544  hypothetical protein  40.38 
 
 
160 aa  43.1  0.001  Acidiphilium cryptum JF-5  Bacteria  normal  0.152364  n/a   
 
 
-
 
NC_008825  Mpe_A0593  hypothetical protein  32.46 
 
 
153 aa  41.6  0.004  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00333094  normal 
 
 
-
 
NC_011901  Tgr7_1392  glutaredoxin  33.33 
 
 
263 aa  41.2  0.005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_006692  CNG01760  hypothetical protein  31.18 
 
 
469 aa  40.4  0.008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.610994  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>