Gene Pnec_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1071 
Symbol 
ID6183976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp931438 
End bp931755 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content49% 
IMG OID641671683 
Producthypothetical protein 
Protein accessionYP_001797860 
Protein GI171463747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.0775685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCCA TTCCACCTTT AGTACAAAAA CTTGCCTATG CCGGACTCAT TCCATTCATT 
GGATTAGCGT TACTGGTGCA GCTAGCGCCA ACACCAATCA ACTACTTGAG CGCAGAATCC 
TTGGCGGGTT GCGGGGCCGT GATTACTTCA TTTATGGGAG CATTACATTG GGGCGCCAAT 
TTGCACCTGT TAGGCAAAGC GCTTGCTGGC GATCACTGGG AAGACCGTAA CGCGTGGATC 
TGGGGCGTTA TTCCAGCTTT AGTTACCCGT AGGCCTGCTG ATCCTTGCAT CTACTTTGAT 
TATTCAGCGC AATATTGA
 
Protein sequence
MNPIPPLVQK LAYAGLIPFI GLALLVQLAP TPINYLSAES LAGCGAVITS FMGALHWGAN 
LHLLGKALAG DHWEDRNAWI WGVIPALVTR RPADPCIYFD YSAQY