| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1800 |
|---|
| Symbol | |
|---|
| ID | 8807572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1917216 |
|---|
| End bp | 1918031 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003461027 |
|---|
| Protein GI | 289208961 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00000291935 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG TTGTCCAGGC CATGAGCGAC TGGCCCCGCG AGGTGCGCGA GGCACTGGCG
CGGTACGAGG TCGTGGCGAT TACGTCGGGG TTGTCCGATG TGCGCGATGC CGAGGCGCTG
CTGGAGGCGA TGCTCCCGGG ACGCTGGGTG CGCCTGGAGT GGGGCATGGG CTCTGCTCAC
AGCCGCGAGC AGTTTCATGC CCTGCAGCAG GCGACTGGAG CCGATGTGTT GCCCTATTTC
GTTGCGCGGG ACGGTGCAAT CGGGGGGCTC CCCGAGTTGC GCGAATACCT CGGCGCGCGG
GCTGTCGCGG CCGGGGCCAA CCGAGGCCCG CGTGACGCCG CGGAACGGGC CGGGCAAACG
CAACGGTCCC AGGAAGCCTT GGCACCGATG CTTCAGGTGC TGGGATACGG AGGGCTAATC
CCCTTTGTGG CCCTGGGCAT CGGGACGTGG ATGGCCCAGC CGGAATGGCA GGTTTTCGCG
CTCGAGGCCC TGGCGTTTTA TGGTGCCGTT ATCCTGTCGT TTCTCGGGGC GATCCACTGG
GGGCTTTACC TGGCGGATCG CGAACACCGG GTGGGCCCGC TGTCGGCGCC CGTGTGGGCG
GTGGTCCCGG CGATCCTCGC CTGGCTTACG TTGCTGCAAC CGTTGCCCGA GGCACTGATG
ACCCTGGCCG TGCTGTTTCT GGGGGCGCTG TGGGTGGACC GCCTGAGCCT GCGTGGGCGG
CCGTTGCCGC GTGGGTACCT GGGGATGCGC CTGGTGCTGA CCGCGGGGGC CATCGTATCG
CTGGCCTCTG GGCTGGCCGT TATCATGGGG CGCTGA
|
|---|
| Protein sequence | MNDVVQAMSD WPREVREALA RYEVVAITSG LSDVRDAEAL LEAMLPGRWV RLEWGMGSAH
SREQFHALQQ ATGADVLPYF VARDGAIGGL PELREYLGAR AVAAGANRGP RDAAERAGQT
QRSQEALAPM LQVLGYGGLI PFVALGIGTW MAQPEWQVFA LEALAFYGAV ILSFLGAIHW
GLYLADREHR VGPLSAPVWA VVPAILAWLT LLQPLPEALM TLAVLFLGAL WVDRLSLRGR
PLPRGYLGMR LVLTAGAIVS LASGLAVIMG R
|
|---|
| |