9 homologs were found in PanDaTox collection
for query gene Phep_1833 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_1833  peptidoglycan binding domain-containing protein  100 
 
 
148 aa  305  1.0000000000000001e-82  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0439402  hitchhiker  0.00000000491312 
 
 
-
 
NC_013061  Phep_0926  hypothetical protein  54.93 
 
 
164 aa  173  6e-43  Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.00000156201  unclonable  0.00000000000301001 
 
 
-
 
NC_009441  Fjoh_2070  CHAP domain-containing protein  35.21 
 
 
150 aa  66.6  0.0000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2481  peptidoglycan binding domain-containing protein  32.68 
 
 
497 aa  59.3  0.00000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0485388  normal  0.126886 
 
 
-
 
NC_013510  Tcur_1369  hypothetical protein  29.93 
 
 
349 aa  45.4  0.0003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0215137  n/a   
 
 
-
 
NC_013595  Sros_5548  hypothetical protein  32.26 
 
 
359 aa  44.7  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.352514  normal  0.222506 
 
 
-
 
NC_013739  Cwoe_0079  CHAP domain containing protein  30.23 
 
 
228 aa  44.3  0.0006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2166  Peptidoglycan-binding lysin domain protein  40.38 
 
 
954 aa  42  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.16902  normal 
 
 
-
 
NC_011146  Gbem_0776  hypothetical protein  37.25 
 
 
186 aa  41.6  0.004  Geobacter bemidjiensis Bem  Bacteria  normal  0.772456  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>