Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1833 |
Symbol | |
ID | 8252936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2125639 |
End bp | 2126085 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644935483 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_003092103 |
Protein GI | 255531731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0439402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000491312 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGGAA AGCGCAATGA CGTGTTGTGT ATTGCACGGG CAGAGATAGG AGTAAGAGAG CTGAGGGGTA ATAATGATGG TAAGCGGGTT GCTGAATATC TGGCCTATAC AGGGATTAAA GTGCCAGCTC CATGGTGTGC CAGTTATGTT TCTTTTGTTT TTGGGAAAGC TGGTTATGCC CAGCCCAGGA CGGCCTGGTC GCCTGCAATG TTTCCGATAT CAAGGATTGT AAAGGAGCCC AAGCCTGCGG ATGTATTTGG GATATGGTTT CCGAGCCTGA AAAGGATTGC GCATGTAGGC TTGGTGGAAA AGGTTAAGGA TAACTGGATT TACAGCATTG AGGGAAATTC ATCGCCGGAT GGGAGCAGGG AAGGTACGGG GGTGTATCAA AGATTAAGGC ATAAGCGAAC GATTAACGCG TATGCAGATT GGATAATTAA CAATTAA
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Protein sequence | MTGKRNDVLC IARAEIGVRE LRGNNDGKRV AEYLAYTGIK VPAPWCASYV SFVFGKAGYA QPRTAWSPAM FPISRIVKEP KPADVFGIWF PSLKRIAHVG LVEKVKDNWI YSIEGNSSPD GSREGTGVYQ RLRHKRTINA YADWIINN
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