Gene Phep_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1833 
Symbol 
ID8252936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2125639 
End bp2126085 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content47% 
IMG OID644935483 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_003092103 
Protein GI255531731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0439402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000491312 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGGAA AGCGCAATGA CGTGTTGTGT ATTGCACGGG CAGAGATAGG AGTAAGAGAG 
CTGAGGGGTA ATAATGATGG TAAGCGGGTT GCTGAATATC TGGCCTATAC AGGGATTAAA
GTGCCAGCTC CATGGTGTGC CAGTTATGTT TCTTTTGTTT TTGGGAAAGC TGGTTATGCC
CAGCCCAGGA CGGCCTGGTC GCCTGCAATG TTTCCGATAT CAAGGATTGT AAAGGAGCCC
AAGCCTGCGG ATGTATTTGG GATATGGTTT CCGAGCCTGA AAAGGATTGC GCATGTAGGC
TTGGTGGAAA AGGTTAAGGA TAACTGGATT TACAGCATTG AGGGAAATTC ATCGCCGGAT
GGGAGCAGGG AAGGTACGGG GGTGTATCAA AGATTAAGGC ATAAGCGAAC GATTAACGCG
TATGCAGATT GGATAATTAA CAATTAA
 
Protein sequence
MTGKRNDVLC IARAEIGVRE LRGNNDGKRV AEYLAYTGIK VPAPWCASYV SFVFGKAGYA 
QPRTAWSPAM FPISRIVKEP KPADVFGIWF PSLKRIAHVG LVEKVKDNWI YSIEGNSSPD
GSREGTGVYQ RLRHKRTINA YADWIINN